DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and Pkn2

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001099225.2 Gene:Pkn2 / 207122 RGDID:620146 Length:983 Species:Rattus norvegicus


Alignment Length:573 Identity:186/573 - (32%)
Similarity:274/573 - (47%) Gaps:125/573 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 RGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTKKKTKTIQKNLNPVF 258
            |..:.||:|.:| .|..::.            |.:|.|      :|..:.:::.|...|      
  Rat   458 RHGMCLYLEPQG-TLFAEVT------------FFNPVI------ERRPKLQRQKKIFSK------ 497

  Fly   259 NETFTFELQPQDRDKRLLIEVWDWDRTSRN-----DFMGSFSFSLEELQKEPVDGWYKFLSQVEG 318
            .:..||...||     :.|.:..|.|..|.     :..|:||      .:.||..          
  Rat   498 QQGKTFLRAPQ-----MNINIATWGRLVRRAIPTVNHSGTFS------PQTPVPA---------- 541

  Fly   319 EHYNIPCVDA-------------------------------------FNDIARLR---------- 336
               .:|.|||                                     .:|.:.||          
  Rat   542 ---TVPVVDARTPELAPPASDSTVTKLDFDLEPEAPPAPPRASSLGEIDDSSELRVLDIPGQGSE 603

  Fly   337 -----DEVRHDRRPNEKRRMDNKDMPHN--------------MSKRDMIRAADFNFVKVIGKGSF 382
                 :..|::.||..|...: .::|.:              ..:|......||....|:|:|.|
  Rat   604 TVFDIENDRNNMRPKSKSEYE-LNIPDSSRSCWSVGELEDKRSQQRFQFNLQDFRCCAVLGRGHF 667

  Fly   383 GKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILAL--SGRPPFLVSMHSCFQTMDRL 445
            |||||||.:.|:|::|:|.|:|..|:..|:::..|.||:|...  |.|.||||::.:||||.:.:
  Rat   668 GKVLLAEYKHTNEMFAIKALKKGDIVARDEVDSLMCEKRIFETVNSVRHPFLVNLFACFQTKEHV 732

  Fly   446 FFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVK 510
            .|||||..|||||.|:.. ..|.|..|:|||..|.:.|.:|||..|:||||||||:|||.||.||
  Rat   733 CFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHEHKIVYRDLKLDNLLLDTEGFVK 796

  Fly   511 LVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDE 575
            :.||||.|||:.....|.||||||.::|||:::...|:.|.|||..|||::|.:.|::||.||||
  Rat   797 IADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE 861

  Fly   576 TTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHPFFRNVDWDKAEAC 640
            ..||.:|.:.:..:|:..|.||:.|:...|.:.|..|||||....:::..|||||..||......
  Rat   862 EEVFDSIVNDEVRYPRFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLTDWSALLDK 926

  Fly   641 EMEPPIKPMIKHRKDISNFDDAFTKEKTDLT-PTDKLFMMNLDQNDFIGFSFM 692
            :::||..|.|:.|:|:|||||.||.|...|| |.:...::..:|..|..|.::
  Rat   927 KVKPPFVPTIRGREDVSNFDDEFTSEAPILTPPREPRILLEEEQEMFRDFDYV 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342
C1 137..190 CDD:412127
C2_PKC_alpha_gamma 194..324 CDD:175992 25/134 (19%)
STKc_PKC 375..692 CDD:270722 146/319 (46%)
Pkn2NP_001099225.2 HR1_PKN_1 42..107 CDD:212012
HR1_PKN2_2 128..201 CDD:212021
HR1_PKN2_3 209..282 CDD:212025
C2_PKN-like 389..472 CDD:176069 5/14 (36%)
STKc_PKN 656..981 CDD:270741 147/325 (45%)
Blue background indicates that the domain is not in the aligned region.

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