DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and Prkch

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_032882.2 Gene:Prkch / 18755 MGIID:97600 Length:683 Species:Mus musculus


Alignment Length:669 Identity:251/669 - (37%)
Similarity:348/669 - (52%) Gaps:136/669 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GNLLEITGEANIVNYMKNRLRKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWG-FGKQGF 100
            |:..|.|.:.:.:.....|.|:.||:|: :..||||:|...:.:.||||.||::|||| |||||:
Mouse   138 GSFTEATLQRDRIFKHFTRKRQRAMRRR-VHQVNGHKFMATYLRQPTYCSHCREFIWGVFGKQGY 201

  Fly   101 QCEECRFNIHQKCCKFVVFKCPGKD--TDFDADCAK------VKHGWISTTYTTPTFCDECGLLL 157
            ||:.|...:|::|...:|..|..::  ...||..|:      :.|.:....|..|||||.||.||
Mouse   202 QCQVCTCVVHKRCHHLIVTACTCQNNINKVDAKIAEQRFGINIPHKFNVHNYKVPTFCDHCGSLL 266

  Fly   158 HGVAHQGVKCENCNLNVHHACQETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMD 222
            .|:..||::|:.|.:|||..||..|.|.||.:..|: .|.|..:.|:..|    |...:.||...
Mouse   267 WGIMRQGLQCKICKMNVHIRCQANVAPNCGVNAVEL-AKTLAGMGLQPGN----ISPTSKLISRS 326

  Fly   223 TNGFSDPYIAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSR 287
            |                                                                
Mouse   327 T---------------------------------------------------------------- 327

  Fly   288 NDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRMD 352
                         |:::..:|      ..||....:.....|.                    :|
Mouse   328 -------------LRRQGKEG------SKEGNGIGVNSSSRFG--------------------ID 353

  Fly   353 NKDMPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPM 417
            |                 |.|::|:||||||||:||..:.|.||||||||:||||:|.||:|..|
Mouse   354 N-----------------FEFIRVLGKGSFGKVMLARIKETGELYAVKVLKKDVILQDDDVECTM 401

  Fly   418 NEKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIA 482
            .||:||:|:...|||..:..||||.||||||||:..|||||:|:|:..||.|:.|.|||.|:..|
Mouse   402 TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA 466

  Fly   483 LFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPY 547
            |.||||:.||||||||||:|||.|||.||.|||:.|||:....||.||||||:|:||||:....|
Mouse   467 LMFLHEKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY 531

  Fly   548 SIAADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNR 612
            ..|.|||:.||||:|.:.|.||||.::|..:|..|.:.:.|:|.....:|..|:.||:||.|..|
Mouse   532 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMR 596

  Fly   613 LGA-GRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKL 676
            ||: .:....||..||||:.:||.:....::|||.:|.||.|:|:||||..|.||:..|||.|:.
Mouse   597 LGSLTQGGEHEILRHPFFKEIDWAQLNHRQLEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEG 661

  Fly   677 FMMNLDQNDFIGFSFMNPE 695
            .:..::|::|..||:::||
Mouse   662 HLPMINQDEFRNFSYVSPE 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 24/52 (46%)
C1_1 137..189 CDD:278556 25/51 (49%)
C2_PKC_alpha_gamma 194..324 CDD:175992 12/129 (9%)
S_TKc 371..629 CDD:214567 143/258 (55%)
STKc_PKC 375..692 CDD:270722 168/317 (53%)
PrkchNP_032882.2 C2_PKC_epsilon 8..140 CDD:175981 1/1 (100%)
C1_1 172..222 CDD:365894 23/49 (47%)
C1_1 246..296 CDD:365894 23/49 (47%)
STKc_nPKC_eta 359..681 CDD:270742 170/322 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839301
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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