DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and Prkcd

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001297611.1 Gene:Prkcd / 18753 MGIID:97598 Length:700 Species:Mus musculus


Alignment Length:654 Identity:240/654 - (36%)
Similarity:341/654 - (52%) Gaps:117/654 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKC 121
            |:||:|:..:..:..|.|...||..||:|..||:|:||..|||::|.:|...||:||...::.:|
Mouse   144 RRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKEFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRC 208

  Fly   122 PG-----KDTDFDADCAKV--KHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQ 179
            .|     :||.|..:...:  .|.:....|.:|||||.||.||.|:..||:|||:|.:||||.|:
Mouse   209 TGTATNSRDTIFQKERFNIDMPHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCR 273

  Fly   180 ETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTK 244
            |.|..:||     :..|||              .||.|.:                 ..||.|..
Mouse   274 EKVANLCG-----INQKLL--------------AEALNQV-----------------TQRSSRKL 302

  Fly   245 KKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGW 309
            ..|:::     .::.   .||.:|:               .|.:|.:|.                
Mouse   303 DTTESV-----GIYQ---GFEKKPE---------------VSGSDILGE---------------- 328

  Fly   310 YKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMI-------R 367
                   .|.|.::..  :|               |:..:..|:.:...|......|       .
Mouse   329 -------AGSHISLKL--SF---------------PSRAKEKDSSETCDNNGTYGKIWEGSTRCT 369

  Fly   368 AADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFL 432
            ..:|.|.||:||||||||||||.:|.|:.:|:|.|:|||::..||:|..|.||::|||:...|||
Mouse   370 LENFTFQKVLGKGSFGKVLLAELKGKDKYFAIKCLKKDVVLIDDDVECTMVEKRVLALAWESPFL 434

  Fly   433 VSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLK 497
            ..:...|||.|.||||||:..|||||:|:|..|||:...|.|||.|:...|.|||.:.|||||||
Mouse   435 THLICTFQTKDHLFFVMEFLNGGDLMFHIQDKGRFELYRATFYAAEIICGLQFLHSKGIIYRDLK 499

  Fly   498 LDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFE 562
            |||::||.:||:|:.|||:.||.:.......||||||:|:||||:....||.:.|||||||||:|
Mouse   500 LDNVMLDRDGHIKIADFGMCKENIFGEGRASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYE 564

  Fly   563 FMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHP 627
            .:.||:||.||||..:|.:|:.....:|:..:.|:.||:.....:.|:.|||    ....|..||
Mouse   565 MLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDIMEKLFERDPDKRLG----VTGNIRIHP 625

  Fly   628 FFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFM 692
            ||:.::|...|..::|||.||.:|...|.||||..|..||..|:.:||..:.::||..|.||||:
Mouse   626 FFKTINWSLLEKRKVEPPFKPKVKSPSDYSNFDPEFLNEKPQLSFSDKNLIDSMDQEAFHGFSFV 690

  Fly   693 NPEF 696
            ||:|
Mouse   691 NPKF 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 23/56 (41%)
C1_1 137..189 CDD:278556 27/51 (53%)
C2_PKC_alpha_gamma 194..324 CDD:175992 18/129 (14%)
S_TKc 371..629 CDD:214567 129/257 (50%)
STKc_PKC 375..692 CDD:270722 154/316 (49%)
PrkcdNP_001297611.1 C1_1 159..208 CDD:365894 21/48 (44%)
C1_1 231..281 CDD:365894 25/49 (51%)
PKc_like 377..692 CDD:389743 155/318 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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