DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and Prkcd

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001297611.1 Gene:Prkcd / 18753 MGIID:97598 Length:700 Species:Mus musculus


Alignment Length:654 Identity:240/654 - (36%)
Similarity:341/654 - (52%) Gaps:117/654 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKC 121
            |:||:|:..:..:..|.|...||..||:|..||:|:||..|||::|.:|...||:||...::.:|
Mouse   144 RRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKEFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRC 208

  Fly   122 PG-----KDTDFDADCAKV--KHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQ 179
            .|     :||.|..:...:  .|.:....|.:|||||.||.||.|:..||:|||:|.:||||.|:
Mouse   209 TGTATNSRDTIFQKERFNIDMPHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCR 273

  Fly   180 ETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTK 244
            |.|..:||     :..|||              .||.|.:                 ..||.|..
Mouse   274 EKVANLCG-----INQKLL--------------AEALNQV-----------------TQRSSRKL 302

  Fly   245 KKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGW 309
            ..|:::     .::.   .||.:|:               .|.:|.:|.                
Mouse   303 DTTESV-----GIYQ---GFEKKPE---------------VSGSDILGE---------------- 328

  Fly   310 YKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMI-------R 367
                   .|.|.::..  :|               |:..:..|:.:...|......|       .
Mouse   329 -------AGSHISLKL--SF---------------PSRAKEKDSSETCDNNGTYGKIWEGSTRCT 369

  Fly   368 AADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFL 432
            ..:|.|.||:||||||||||||.:|.|:.:|:|.|:|||::..||:|..|.||::|||:...|||
Mouse   370 LENFTFQKVLGKGSFGKVLLAELKGKDKYFAIKCLKKDVVLIDDDVECTMVEKRVLALAWESPFL 434

  Fly   433 VSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLK 497
            ..:...|||.|.||||||:..|||||:|:|..|||:...|.|||.|:...|.|||.:.|||||||
Mouse   435 THLICTFQTKDHLFFVMEFLNGGDLMFHIQDKGRFELYRATFYAAEIICGLQFLHSKGIIYRDLK 499

  Fly   498 LDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFE 562
            |||::||.:||:|:.|||:.||.:.......||||||:|:||||:....||.:.|||||||||:|
Mouse   500 LDNVMLDRDGHIKIADFGMCKENIFGEGRASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYE 564

  Fly   563 FMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHP 627
            .:.||:||.||||..:|.:|:.....:|:..:.|:.||:.....:.|:.|||    ....|..||
Mouse   565 MLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDIMEKLFERDPDKRLG----VTGNIRIHP 625

  Fly   628 FFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFM 692
            ||:.::|...|..::|||.||.:|...|.||||..|..||..|:.:||..:.::||..|.||||:
Mouse   626 FFKTINWSLLEKRKVEPPFKPKVKSPSDYSNFDPEFLNEKPQLSFSDKNLIDSMDQEAFHGFSFV 690

  Fly   693 NPEF 696
            ||:|
Mouse   691 NPKF 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 22/51 (43%)
C1 137..190 CDD:412127 27/52 (52%)
C2_PKC_alpha_gamma 194..324 CDD:175992 18/129 (14%)
STKc_PKC 375..692 CDD:270722 154/316 (49%)
PrkcdNP_001297611.1 C1_nPKC_theta-like_rpt1 152..212 CDD:410384 23/59 (39%)
C1_nPKC_theta-like_rpt2 231..280 CDD:410387 25/48 (52%)
Protein Kinases, catalytic domain 377..692 CDD:473864 155/318 (49%)

Return to query results.
Submit another query.