DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and Prkcg

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_035232.1 Gene:Prkcg / 18752 MGIID:97597 Length:697 Species:Mus musculus


Alignment Length:687 Identity:345/687 - (50%)
Similarity:456/687 - (66%) Gaps:28/687 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AGKGPGNLLEITGEANIVNYMKNRLRKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWGFG 96
            ||.|||......|...:.      .||||:::|.:..|..|:|..||||.||:|.||.|||||.|
Mouse     2 AGLGPGGGDSEGGPRPLF------CRKGALRQKVVHEVKSHKFTARFFKQPTFCSHCTDFIWGIG 60

  Fly    97 KQGFQCEECRFNIHQKCCKFVVFKCPGKDTDFDADCAKVKHGWISTTYTTPTFCDECGLLLHGVA 161
            |||.||:.|.|.:|::|.:||.|:|||.......|..:.||.:...:|::|||||.||.||:|:.
Mouse    61 KQGLQCQVCSFVVHRRCHEFVTFECPGAGKGPQTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLV 125

  Fly   162 HQGVKCENCNLNVHHACQETVPPMCGADISEVRGKLLLYVEL-KGNNLKVDIKEAANLIPMDTNG 225
            |||:||..|.:|||..|..:||.:||.|.:|.||:|.|.:.. ..:.:.:.:.||.||||||.||
Mouse   126 HQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERRGRLQLEIRAPTSDEIHITVGEARNLIPMDPNG 190

  Fly   226 FSDPYIAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDF 290
            .||||:.:::.||....||:||||::..||||:||||.|.|:|.|.::||.:|||||||||||||
Mouse   191 LSDPYVKLKLIPDPRNLTKQKTKTVKATLNPVWNETFVFNLKPGDVERRLSVEVWDWDRTSRNDF 255

  Fly   291 MGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFN-DIARLRDEVRHDRRPNEKRRMDNK 354
            ||:.||.:.||.|.|||||||.|:|.|||:||:|..||.| .:.:..:...:.....|:.||...
Mouse   256 MGAMSFGVSELLKAPVDGWYKLLNQEEGEYYNVPVADADNCSLLQKFEACNYPLELYERVRMGPS 320

  Fly   355 DMP-------HNMSKR-------DMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKD 405
            ..|       ...|||       ..:..:||:|:.|:||||||||:||||||:|||||:|:|:||
Mouse   321 SSPIPSPSPSPTDSKRCFFGASPGRLHISDFSFLMVLGKGSFGKVMLAERRGSDELYAIKILKKD 385

  Fly   406 VIIQTDDMELPMNEKKILAL-----SGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYG 465
            ||:|.||::..:.||::|||     .|||.||..:||.|||.|||:|||||..|||||||:||.|
Mouse   386 VIVQDDDVDCTLVEKRVLALGGRGPGGRPHFLTQLHSTFQTPDRLYFVMEYVTGGDLMYHIQQLG 450

  Fly   466 RFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTF 530
            :|||..|.|||.|:||.|||||.:.||||||||||::||.|||:|:.|||:.||.|....|||||
Mouse   451 KFKEPHAAFYAAEIAIGLFFLHNQGIIYRDLKLDNVMLDAEGHIKITDFGMCKENVFPGSTTRTF 515

  Fly   531 CGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSV 595
            ||||:|:||||::|.||..:.|||||||||:|.:|||.||:|:||..:|:.|.::...:||..|.
Mouse   516 CGTPDYIAPEIIAYQPYGKSVDWWSFGVLLYEMLAGQPPFDGEDEEELFQAIMEQTVTYPKSLSR 580

  Fly   596 EAMDIITSFLTKKPNNRLGAGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFD 660
            ||:.|...||||.|..|||:|......|..|.|||.:||::.|..|:.||.:|....|.. .|||
Mouse   581 EAVAICKGFLTKHPGKRLGSGPDGEPTIRAHGFFRWIDWERLERLEIAPPFRPRPCGRSG-ENFD 644

  Fly   661 DAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFMNPEFI 697
            ..||:....|||.|:|.:.::||.||.||:::||:|:
Mouse   645 KFFTRAAPALTPPDRLVLASIDQADFQGFTYVNPDFV 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 31/51 (61%)
C1_1 137..189 CDD:278556 26/51 (51%)
C2_PKC_alpha_gamma 194..324 CDD:175992 74/130 (57%)
S_TKc 371..629 CDD:214567 155/262 (59%)
STKc_PKC 375..692 CDD:270722 180/321 (56%)
PrkcgNP_035232.1 C1_cPKC_rpt1 34..91 CDD:410383 32/56 (57%)
C1_cPKC_rpt2 101..154 CDD:410386 26/52 (50%)
C2_PKC_alpha_gamma 158..289 CDD:175992 74/130 (57%)
STKc_cPKC 354..677 CDD:270739 180/323 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839303
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0696
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D614710at2759
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103255
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.710

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