DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and Prkcb

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_032881.1 Gene:Prkcb / 18751 MGIID:97596 Length:673 Species:Mus musculus


Alignment Length:682 Identity:349/682 - (51%)
Similarity:465/682 - (68%) Gaps:30/682 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PAAGAGKGPGNLLEITGEANIVNYMKNRLRKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFI 92
            ||||....       .||.:.|.:    .||||:::|.:..|..|:|..||||.||:|.||.|||
Mouse     4 PAAGPPPS-------EGEESTVRF----ARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFI 57

  Fly    93 WGFGKQGFQCEECRFNIHQKCCKFVVFKCPGKDTDFDADCAKVKHGWISTTYTTPTFCDECGLLL 157
            ||||||||||:.|.|.:|::|.:||.|.|||.|....:|..:.||.:...||::|||||.||.||
Mouse    58 WGFGKQGFQCQVCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLL 122

  Fly   158 HGVAHQGVKCENCNLNVHHACQETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMD 222
            :|:.|||:||:.|.:|||..|...||.:||.|.:|.||::.:...:....|.|.:::|.||:|||
Mouse   123 YGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHTERRGRIYIQAHIDREVLIVVVRDAKNLVPMD 187

  Fly   223 TNGFSDPYIAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSR 287
            .||.||||:.:::.||....:|:|||||:.:|||.:||||.|:|:..|:|:||.:|:||||.|||
Mouse   188 PNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSR 252

  Fly   288 NDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPC-VDAFNDIARLRDEVRH------DRRP 345
            ||||||.||.:.||||..||||:|.|||.|||::|:|. .:.......||.:...      .:.|
Mouse   253 NDFMGSLSFGISELQKAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAP 317

  Fly   346 NEK-----RRMDNKDMPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKD 405
            .||     .:.||.      ..||.::..||||:.|:||||||||:|:||:|||||||||:|:||
Mouse   318 EEKTANTISKFDNN------GNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD 376

  Fly   406 VIIQTDDMELPMNEKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKES 470
            |:||.||:|..|.||::|||.|:||||..:||||||||||:|||||..|||||||:||.|||||.
Mouse   377 VVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP 441

  Fly   471 VAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPN 535
            .|:|||.|:||.||||..:.||||||||||::||.|||:|:.|||:.||.:.:..||:||||||:
Mouse   442 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPD 506

  Fly   536 YMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDI 600
            |:||||::|.||..:.|||:|||||:|.:||||||||:||..:|::|.:....:||..|.||:.|
Mouse   507 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 571

  Fly   601 ITSFLTKKPNNRLGAGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTK 665
            ....:||.|..|||.|....::|..|.|||.:||:|.|..|::||.||....| :..|||..||:
Mouse   572 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRFFTR 635

  Fly   666 EKTDLTPTDKLFMMNLDQNDFIGFSFMNPEFI 697
            ....|||.|:..:.|:||::|.||||:|.||:
Mouse   636 HPPVLTPPDQEVIRNIDQSEFEGFSFVNSEFL 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 33/51 (65%)
C1_1 137..189 CDD:278556 27/51 (53%)
C2_PKC_alpha_gamma 194..324 CDD:175992 69/129 (53%)
S_TKc 371..629 CDD:214567 157/257 (61%)
STKc_PKC 375..692 CDD:270722 183/316 (58%)
PrkcbNP_032881.1 C1_cPKC_rpt1 35..92 CDD:410383 35/56 (63%)
C1_cPKC_rpt2 102..155 CDD:410386 27/52 (52%)
C2_PKC_alpha_gamma 159..289 CDD:175992 69/129 (53%)
STKc_cPKC_beta 341..663 CDD:270767 188/322 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839297
Domainoid 1 1.000 63 1.000 Domainoid score I10199
eggNOG 1 0.900 - - E1_KOG0696
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143719at33208
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103255
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.710

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