DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and Prkcd

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_579841.2 Gene:Prkcd / 170538 RGDID:67383 Length:673 Species:Rattus norvegicus


Alignment Length:654 Identity:235/654 - (35%)
Similarity:329/654 - (50%) Gaps:143/654 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKC 121
            |:||:|:..:..:..|.|...||..||:|..||:|:||..|||::|.:|...||:||...::.:|
  Rat   144 RRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKEFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRC 208

  Fly   122 PG-----KDTDFDADCAKV--KHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQ 179
            .|     :||.|..:...:  .|.:....|.:|||||.||.||.|:..||:|||:|.:||||.|:
  Rat   209 TGTATNSRDTIFQKERFNIDMPHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCR 273

  Fly   180 ETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTK 244
            |.|..:||     :..|||              .||.|.:                       |:
  Rat   274 EKVANLCG-----INQKLL--------------AEALNQV-----------------------TQ 296

  Fly   245 KKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGW 309
            |.::      .|...||                             :|.:            .|:
  Rat   297 KASR------KPETPET-----------------------------VGIY------------QGF 314

  Fly   310 YKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMI-------R 367
            .|                                    |..:...|:|.|......|       |
  Rat   315 EK------------------------------------KTAVSGNDIPDNNGTYGKIWEGSNRCR 343

  Fly   368 AADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFL 432
            ..:|.|.||:||||||||||||.:|.:..:|:|.|:|||::..||:|..|.||::|||:...|||
  Rat   344 LENFTFQKVLGKGSFGKVLLAELKGKERYFAIKYLKKDVVLIDDDVECTMVEKRVLALAWENPFL 408

  Fly   433 VSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLK 497
            ..:...|||.|.||||||:..|||||:|:|..|||:...|.|||.|:...|.|||.:.|||||||
  Rat   409 THLICTFQTKDHLFFVMEFLNGGDLMFHIQDKGRFELYRATFYAAEIICGLQFLHGKGIIYRDLK 473

  Fly   498 LDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFE 562
            |||::||.:||:|:.|||:.||.:.......||||||:|:||||:....||.:.|||||||||:|
  Rat   474 LDNVMLDKDGHIKIADFGMCKENIFGENRASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYE 538

  Fly   563 FMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHP 627
            .:.||:||.||||..:|.:|:.....:|:..:.|:.||:.....:.|..|||    ....|..||
  Rat   539 MLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDIMEKLFERDPAKRLG----VTGNIRLHP 599

  Fly   628 FFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFM 692
            ||:.::|:..|..::|||.||.:|...|.||||..|..||..|:.:||..:.::||..|.||||:
  Rat   600 FFKTINWNLLEKRKVEPPFKPKVKSPSDYSNFDPEFLNEKPQLSFSDKNLIDSMDQTAFKGFSFV 664

  Fly   693 NPEF 696
            ||::
  Rat   665 NPKY 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 23/56 (41%)
C1_1 137..189 CDD:278556 27/51 (53%)
C2_PKC_alpha_gamma 194..324 CDD:175992 14/129 (11%)
S_TKc 371..629 CDD:214567 128/257 (50%)
STKc_PKC 375..692 CDD:270722 153/316 (48%)
PrkcdNP_579841.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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