DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and aPKC

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_061518621.1 Gene:aPKC / 1280683 VectorBaseID:AGAMI1_009490 Length:826 Species:Anopheles gambiae


Alignment Length:702 Identity:220/702 - (31%)
Similarity:315/702 - (44%) Gaps:216/702 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ATVLPPSVPSAAPGAKAPAAGAGKGPGNLLEITGEANIVNYMKNRLRKGAMKRKGLEMVNGHRFG 75
            |||. |:||||              ||  |...||...:      .|:||.:.:.|..:|||.|.
Mosquito   324 ATVF-PNVPSA--------------PG--LSCVGEDRSI------YRRGARRWRKLYRINGHIFQ 365

  Fly    76 VRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKCPGKDTDFDADCAKVKHGWI 140
            .:.|....:|..|.|.|||.|:|||:|.:|:..:|:||.|.                        
Mosquito   366 AKRFNRKAFCAFCHDRIWGLGRQGFKCIQCKLLVHKKCHKL------------------------ 406

  Fly   141 STTYTTPTFCDECGLLLHGVAHQGVK-CENCNLNVHHACQETVPPMCGADISEVRGKLLLYVELK 204
                                   |.| |.|          |.|.|:                   
Mosquito   407 -----------------------GNKPCSN----------EHVEPV------------------- 419

  Fly   205 GNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQ 269
                   .||..:..|.|.:...|                    .||..|:      :..||...
Mosquito   420 -------FKERDHHDPNDESSTGD--------------------VIQAPLD------YPSELHSG 451

  Fly   270 DRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDIAR 334
            |...::.:||        ||       ::||.           |..|....|::           
Mosquito   452 DGCDQVPVEV--------ND-------NVEET-----------LEPVTQRQYSL----------- 479

  Fly   335 LRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAV 399
                                              .||..::|||:||:.|||:.|.:.|..:||:
Mosquito   480 ----------------------------------NDFELIRVIGRGSYAKVLMVELKKTRRIYAM 510

  Fly   400 KVLRKDVIIQTDDMELPMNEKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQY 464
            ||::|.::...:|::....||.:...:...||||.:||||||..|||||:|:.:|||||:|||:.
Mosquito   511 KVIKKALVTDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMFHMQRQ 575

  Fly   465 GRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRT 529
            .|..|..|.|||.|:::||.||||:.||||||||||:|||.|||:||.|:|:.|||:....||.|
Mosquito   576 RRLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTST 640

  Fly   530 FCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPF------EGDDETT---VFRNIKDK 585
            |||||||:||||:..:.|..:.|||:.||||:|.:||::||      |..|:.|   :|:.|.:|
Mosquito   641 FCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDIAGASENPDQNTEDYLFQVILEK 705

  Fly   586 KAVFPKHFSVEAMDIITSFLTKKPNNRLGAGR-YARQEITTHPFFRNVDWDKAEACEMEPPIKPM 649
            ....|:..||:|..::..||.|.|.:|||..| .|..:|..|.||:::||:.....|:.||..|.
Mosquito   706 TIRIPRSLSVKAASVLKGFLNKNPADRLGCNRDSAFLDIMNHSFFKSIDWEMLAQKEVTPPYIPS 770

  Fly   650 IKH-RKDIS-NFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFMNPEFITI 699
            ... .:||: :||..||:|..||||.|...:..:||::|.||.::||..:::
Mosquito   771 FDGCDQDITCHFDPQFTREPADLTPDDPRVIDKIDQSEFEGFEYVNPLLMSL 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 20/51 (39%)
C1 137..190 CDD:412127 7/53 (13%)
C2_PKC_alpha_gamma 194..324 CDD:175992 20/129 (16%)
STKc_PKC 375..692 CDD:270722 151/328 (46%)
aPKCXP_061518621.1 None

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