DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and prkci

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_571930.2 Gene:prkci / 117507 ZFINID:ZDB-GENE-011105-1 Length:588 Species:Danio rerio


Alignment Length:689 Identity:209/689 - (30%)
Similarity:296/689 - (42%) Gaps:219/689 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PSVPSAAPGAKAPAAGAGKGPGNLLEITGEANIVNYMKNRLRKGAMKRKGLEMVNGHRFGVRFFK 80
            |.||. .||...|               ||.      |:..|:||.:.:.|....||.|..:.|.
Zfish   100 PCVPE-KPGMPCP---------------GED------KSIYRRGARRWRKLYYATGHAFQAKRFN 142

  Fly    81 NPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKCPGKDTDFDADCAKVKHGWISTTYT 145
            ...:|..|.|.|||.|:||::|..|:..:|:||.|.|..:| |:....|                
Zfish   143 RRAHCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLVTVEC-GRQVIQD---------------- 190

  Fly   146 TPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQETVPPMCGADISEVRGKLLLYVELKGNNLKV 210
                                                  ||.|.                      
Zfish   191 --------------------------------------PMIGR---------------------- 195

  Fly   211 DIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRL 275
                            .||......|||:....|..|::|..                       
Zfish   196 ----------------IDPGSTHPEHPDQVLGKKNSTESINH----------------------- 221

  Fly   276 LIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFNDIARLRDEVR 340
                                                     |||                     
Zfish   222 -----------------------------------------EGE--------------------- 224

  Fly   341 HDRRPNEKRRMDNKDMPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKD 405
                  |...:.:::....:|...:|   ||:.::|||:||:.||||...:.|:.:||:||::|:
Zfish   225 ------EHEAVGSRESGKAVSSLGLI---DFDLLRVIGRGSYAKVLLVRLKKTERIYAMKVVKKE 280

  Fly   406 VIIQTDDMELPMNEKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKES 470
            ::...:|::....||.:...:...||||.:||||||..|||||:||..|||||:|||:..:..|.
Zfish   281 LVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE 345

  Fly   471 VAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPN 535
            .|.||:.|:::||.:||||.||||||||||:|||.|||:||.|:|:.|||:....||.|||||||
Zfish   346 HARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN 410

  Fly   536 YMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPF------EGDDETT---VFRNIKDKKAVFPK 591
            |:||||:..:.|..:.|||:.|||:||.|||::||      :..|:.|   :|:.|.:|:...|:
Zfish   411 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 475

  Fly   592 HFSVEAMDIITSFLTKKPNNRLGA-GRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKD 655
            ..||:|..::..||.|:...|||. .:....:|..||||||||||..|..::.||.||.|.....
Zfish   476 SLSVKAASVLKGFLNKESKERLGCHPQTGFADIMAHPFFRNVDWDLMEQKQVVPPFKPNISGEFG 540

  Fly   656 ISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFMNP 694
            :.|||..||.|...|||.|...:..:||::|.||.::||
Zfish   541 LDNFDAQFTNEPIQLTPDDDDAVKKIDQSEFEGFEYINP 579

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 20/51 (39%)
C1_1 137..189 CDD:278556 3/51 (6%)
C2_PKC_alpha_gamma 194..324 CDD:175992 11/129 (9%)
S_TKc 371..629 CDD:214567 124/267 (46%)
STKc_PKC 375..692 CDD:270722 152/326 (47%)