DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and prkce

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_012818146.1 Gene:prkce / 100135720 XenbaseID:XB-GENE-981655 Length:753 Species:Xenopus tropicalis


Alignment Length:683 Identity:260/683 - (38%)
Similarity:367/683 - (53%) Gaps:122/683 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 MKNRLRKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWG-FGKQGFQCEECRFNIHQKCCK 115
            |:.|.|:||::|: :..||||:|...:.:.||||.||:||||| .||||:||:.|...:|::|.:
 Frog   151 MRPRKRQGAVRRR-VHQVNGHKFMATYLRQPTYCSHCRDFIWGVIGKQGYQCQVCTCVVHKRCHE 214

  Fly   116 FVVFKCPGKDTDFDAD-------CAKVKHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLN 173
            .::.||.|.......|       ...:.|.:....|..|||||.||.||.|:..||::|:.|.:|
 Frog   215 LIITKCAGLKKQETPDEVGSQRFSVNMPHKFGIHNYKVPTFCDHCGSLLWGLLRQGLQCKVCKMN 279

  Fly   174 VHHACQETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPD 238
            ||..|:..|.|.||                                 :|:.|.:.....:.:.||
 Frog   280 VHRRCESNVAPNCG---------------------------------VDSRGIAKVLADLGVTPD 311

  Fly   239 R---SGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEE 300
            :   :|:.:||                                       .||    :..||..:
 Frog   312 KITAAGQRRKK---------------------------------------KRN----ALIFSPMK 333

  Fly   301 L-----QKEPVDGWYKFLSQVEGEHY----NIPCVDAFNDIA-RLRDEVRHDRRPNEKRRM---- 351
            |     .::||.|.    ..||.:..    ..||.....|:. .:|..:..|.|..|.:..    
 Frog   334 LIAGAETQQPVPGG----PAVEDDRSKSAPTSPCDQEIKDLENNIRKALSFDNRGEEHKSTATAA 394

  Fly   352 ------------DNKDMPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRK 404
                        :|.::..:..||..:.  ||||:||:||||||||:|||.:|.||:||||||:|
 Frog   395 TENQLSGTGENGENGEVKLHEHKRTGLE--DFNFIKVLGKGSFGKVMLAELKGRDEVYAVKVLKK 457

  Fly   405 DVIIQTDDMELPMNEKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKE 469
            |||:|.||::..|.||:||||:.|.|:|..::.||||.|||||||||..|||||:.:|:..:|.|
 Frog   458 DVILQDDDVDCTMTEKRILALARRHPYLTQLYCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDE 522

  Fly   470 SVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTP 534
            ..:.|||.||..||.|||:..:|||||||||||||.|||.||.|||:.|||:....||.||||||
 Frog   523 PRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP 587

  Fly   535 NYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMD 599
            :|:||||:....|..:.|||:.|||::|.||||.|||.|:|..:|.:|.....::|...|.||:.
 Frog   588 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVS 652

  Fly   600 IITSFLTKKPNNRLG--AGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDA 662
            |:.:|:||.||.|||  |.:...:.|..||||:.:||...|..:::||.||.||.::|::|||..
 Frog   653 ILKAFMTKNPNKRLGCVAAQGLEEAIKQHPFFKEIDWVLLEQRKVKPPFKPRIKTKRDVNNFDQD 717

  Fly   663 FTKEKTDLTPTDKLFMMNLDQNDFIGFSFMNPE 695
            ||:|:..||..|:..:..::|.:|.|||:...|
 Frog   718 FTREEPVLTLVDEAIVKQINQEEFKGFSYFGEE 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 24/52 (46%)
C1_1 137..189 CDD:278556 24/51 (47%)
C2_PKC_alpha_gamma 194..324 CDD:175992 17/141 (12%)
S_TKc 371..629 CDD:214567 146/259 (56%)
STKc_PKC 375..692 CDD:270722 169/318 (53%)
prkceXP_012818146.1 C2_PKC_epsilon 3..135 CDD:175981
C1_1 170..220 CDD:365894 22/49 (45%)
C1_1 243..293 CDD:365894 22/49 (45%)
STKc_nPKC_epsilon 428..748 CDD:270743 169/319 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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