DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and prkcq

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_012813823.2 Gene:prkcq / 100038268 XenbaseID:XB-GENE-487643 Length:699 Species:Xenopus tropicalis


Alignment Length:658 Identity:235/658 - (35%)
Similarity:351/658 - (53%) Gaps:115/658 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKC 121
            |:||||:..:..|..|.|...||..||:|..|.:|:||..|||:||.:|...||:||...|:.||
 Frog   142 RRGAMKQAKVHQVKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKC 206

  Fly   122 PG-----KDTDFDADCAKV--KHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQ 179
            .|     |:|....:..|:  .|.:....|.:||||:.||.||.|:|.||:||..||:||||.|.
 Frog   207 TGSAVNSKETVLHKERFKIDMPHRFKVNNYRSPTFCEHCGTLLWGLARQGLKCAECNMNVHHKCA 271

  Fly   180 ETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTK 244
            ..|..:||     |..||:                |..|..::|.              :..|.:
 Frog   272 VKVANLCG-----VNQKLM----------------AEALAMIETT--------------QQDRRQ 301

  Fly   245 KKTKTIQK----NLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMG-SFSFSLE--ELQ 302
            :.::.|.:    |:.|..|          .:|:.:::.:       :.:..| |:...:|  ::|
 Frog   302 RDSEFIYREGPVNVGPTTN----------TQDQPIVLSI-------KKESQGISWESPIESIKVQ 349

  Fly   303 KEPVDGWYKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMIR 367
            :.|                                       |..:.:::..      |.:..:.
 Frog   350 ESP---------------------------------------PEPELKIEQS------SCQIKVT 369

  Fly   368 AADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFL 432
            .:||...|::||||||||.|||.:.|::.:|:|||:|||::..||:|..|.||::|:|:...|||
 Frog   370 FSDFVLHKMLGKGSFGKVFLAELKRTNQFFAIKVLKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 434

  Fly   433 VSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLK 497
            ..::..|||.:.|||||||..|||||:|:|...:|....|.|||.|:...|.|||.:.::|||||
 Frog   435 THLYCTFQTKEHLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIVCGLQFLHSKGVVYRDLK 499

  Fly   498 LDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFE 562
            |||||||.|||:|:.|||:.||.:.....|.||||||:|:||||:....|:.:.|||||||||:|
 Frog   500 LDNILLDMEGHIKIADFGMCKESMLGDAKTSTFCGTPDYIAPEILLGQKYNYSVDWWSFGVLLYE 564

  Fly   563 FMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHP 627
            .:.||:||.|.||..:|::|:....::|:..|:||.||:.....::|..|||    .:.:|..|.
 Frog   565 MLIGQSPFHGIDEEELFQSIRMDNPMYPRFLSMEAKDILIMLFVREPERRLG----VKGDIRQHC 625

  Fly   628 FFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFM 692
            ||:::||.:.|..|:|||.||.:|...|.||||..|..||..|:.:::..:.::|||.|..|||:
 Frog   626 FFQHIDWGRLENREIEPPFKPKVKSADDWSNFDKEFLNEKPRLSSSERTLINSMDQNMFNNFSFV 690

  Fly   693 NPEFITII 700
            ||:...|:
 Frog   691 NPKMEAIV 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 24/51 (47%)
C1 137..190 CDD:412127 26/52 (50%)
C2_PKC_alpha_gamma 194..324 CDD:175992 16/136 (12%)
STKc_PKC 375..692 CDD:270722 150/316 (47%)
prkcqXP_012813823.2 C1_nPKC_theta-like_rpt1 150..210 CDD:410384 26/59 (44%)
C1_nPKC_theta-like_rpt2 229..278 CDD:410387 24/48 (50%)
STKc_nPKC_theta 367..697 CDD:270770 155/333 (47%)

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