DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and pkn1b

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001082929.1 Gene:pkn1b / 100007897 ZFINID:ZDB-GENE-070424-87 Length:909 Species:Danio rerio


Alignment Length:578 Identity:184/578 - (31%)
Similarity:283/578 - (48%) Gaps:86/578 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 VKCENCNLNVHHACQETVPPMCGADISEVRGKLLLYVEL-KGNNLKV-----DIKEAANLIPMDT 223
            :|.|||          .|...|...:.|........:|| :...:::     |.:....|..:..
Zfish   366 LKLENC----------VVGQTCWKSVGEQTWDQTFTLELERSREMEIALYWKDYRSLCALKYLKL 420

  Fly   224 NGFSDPY---IAVQMHP---------------DRSGRTKKKTKTIQKNLNPVFNETFTFELQPQD 270
            ..|.|..   :.:::.|               :|..|.:::.|...|.....|.           
Zfish   421 EDFLDNQRHRVQLELEPQGLLLAEVMFFNPVIERGPRLQRQRKVFSKQQGKAFL----------- 474

  Fly   271 RDKRLLIEVWDWDRTSRNDFM--------------GSFSFSLEELQKEPVDGWYKFLSQVEGEHY 321
            |.|::.:::..|.|..:|...              .|...|::::             |::||  
Zfish   475 RAKQMNVDMATWVRLLKNAITIPTHNYTQHSHTHHSSSEISIQKI-------------QLDGE-- 524

  Fly   322 NIPCVDAFN-------DIARLRDEVR-HDRRPNEKRRMDNKDMPHNMSKRDMIRAADFNFVKVIG 378
            :.|.|...|       |..|..:.|. ....|.|:.......:....|.:..:...||..:.|:|
Zfish   525 SPPSVTRRNTHTSATVDFGRAAEPVSPPGPAPPERVVRSISHLSQRRSSKSALCLQDFRMIAVLG 589

  Fly   379 KGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILAL--SGRPPFLVSMHSCFQT 441
            :|.||||||:|.|.:..|||:|.|:|..|:..|::|..|.||:|...  |.:.||||::.:||||
Zfish   590 RGHFGKVLLSEYRRSGNLYAIKALKKGDIVARDEVESLMCEKRIFETVNSAQHPFLVNLFACFQT 654

  Fly   442 MDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGE 506
            .:.:.|||||..|||||.|:.. ..|.|:.::||:..|.:.|.|||:..|:||||||||:|||.|
Zfish   655 PEHVCFVMEYTAGGDLMMHIHA-DVFSETRSVFYSACVVLGLQFLHDNKIVYRDLKLDNLLLDTE 718

  Fly   507 GHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFE 571
            |:||:.||||.|||:.....|.||||||.::|||:::...|:.|.|||..|||::|.|.|::||.
Zfish   719 GYVKIADFGLCKEGMGHGDRTSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLIYEMMVGESPFP 783

  Fly   572 GDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHPFFRNVDWDK 636
            ||||..||.:|.:.:..:|:..|.||:.|:...|.:.|..|||:|....::|...|||||:|||.
Zfish   784 GDDEEEVFDSIVNDEVRYPRFLSTEAIGIMRRLLRRNPERRLGSGEKDAEDIKKQPFFRNMDWDA 848

  Fly   637 AEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLT-PTDKLFMMNLDQNDFIGFSFMN 693
            ....::.||..|.:.:.:|:||||..||.|...|| |.::..:...||:.|..|.:::
Zfish   849 LLQRKVPPPFVPAVANSEDVSNFDAEFTNEAPTLTPPRERRSLSRKDQDYFKDFDYVS 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556
C1_1 137..189 CDD:278556 6/23 (26%)
C2_PKC_alpha_gamma 194..324 CDD:175992 22/167 (13%)
S_TKc 371..629 CDD:214567 120/259 (46%)
STKc_PKC 375..692 CDD:270722 144/319 (45%)
pkn1bNP_001082929.1 HR1_PKN_1 15..80 CDD:212012
HR1_PKN1_2 99..176 CDD:212020
HR1_PKN1_3 180..253 CDD:212026
C2 364..447 CDD:301316 14/90 (16%)
STKc_PKN 582..907 CDD:270741 145/326 (44%)
S_TKc 582..841 CDD:214567 120/259 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583322
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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