DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and prkcba

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_957323.1 Gene:prkcba / 100006675 ZFINID:ZDB-GENE-040426-1354 Length:668 Species:Danio rerio


Alignment Length:652 Identity:331/652 - (50%)
Similarity:455/652 - (69%) Gaps:13/652 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKC 121
            |:||:::|.:..|..|:|..||||.||:|.||.|||||||||||||:.|.|.:|::|.:||.|.|
Zfish    18 RQGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVHFSC 82

  Fly   122 PGKDTDFDADCAKVKHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQETVPPMC 186
            ||.|....:|..:..|.:...|||:|||||.||.||:|:.|||::|.||.:|:|..|.:.||.:|
Zfish    83 PGSDKGPASDDPRKYHSFKVHTYTSPTFCDHCGSLLYGLIHQGMRCLNCLMNIHKRCFKHVPSLC 147

  Fly   187 GADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTKKKTKTIQ 251
            |.|.:|.||:|.....:.||.|.|.:|||.||:|||.:|.||||:.:::.||....:|:|||||:
Zfish   148 GTDHTEKRGRLHFSASITGNVLSVSVKEARNLVPMDPSGLSDPYVKLKLIPDPKSESKQKTKTIK 212

  Fly   252 KNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYKFLSQV 316
            ..||||:||.|||.|:..|:|:||.:|||||||.:|||:|||.||.:.||..:.||||:|.|:..
Zfish   213 GCLNPVWNEDFTFALKDTDKDRRLYVEVWDWDRGTRNDYMGSMSFGISELMNQSVDGWFKILACE 277

  Fly   317 EGEHYNIPCV----DAFNDIARLRDEVRHDRRPN-----EKRRMDNKDMPHNMSKRDMIRAADFN 372
            ||..:|:|..    :...::::..:..:.....|     .|..:...|...|   :|.::.||||
Zfish   278 EGVFFNVPVYVDEEEGNKELSKRFERAKIGPGTNNTDGASKNDLSKYDANGN---QDRMKLADFN 339

  Fly   373 FVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFLVSMHS 437
            |:.|:||||||||:||||:|:|||||||:|:|||:||.||:|..|.||::|||||:||||..:||
Zfish   340 FIMVLGKGSFGKVMLAERKGSDELYAVKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTHLHS 404

  Fly   438 CFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNIL 502
            ||||||||:|||||..|||||:.:||.|:|||.:|:|||.|:||.|||||.:.||||||||||::
Zfish   405 CFQTMDRLYFVMEYISGGDLMFQIQQTGKFKEPLAVFYAGEIAIGLFFLHSKGIIYRDLKLDNVM 469

  Fly   503 LDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQ 567
            ||.|||:|:.|||:.||.:.::.||:||||||:|:||||::|.||..:.|||::||||:|.:|||
Zfish   470 LDSEGHIKIADFGMCKENMFDKDTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 534

  Fly   568 APFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHPFFRNV 632
            .||:|:||..:|::|.:....:||..|.||:.|....:||.|..|||.|....::|..|.|||.|
Zfish   535 PPFDGEDEDELFQSIMEHHVSYPKSMSKEAVAICKGLMTKHPGKRLGCGLEGERDIKEHAFFRFV 599

  Fly   633 DWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFMNPEFI 697
            ||::.:..|::||.||....| |..|||..||:....|||.|...:.||||.:|.|||::|.:|.
Zfish   600 DWERLQNKEVQPPYKPKSCGR-DAGNFDLFFTRHPPILTPPDLEVIQNLDQEEFRGFSYVNTKFA 663

  Fly   698 TI 699
            ::
Zfish   664 SM 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 32/51 (63%)
C1 137..190 CDD:412127 27/52 (52%)
C2_PKC_alpha_gamma 194..324 CDD:175992 68/129 (53%)
STKc_PKC 375..692 CDD:270722 180/316 (57%)
prkcbaNP_957323.1 C1_cPKC_rpt1 31..88 CDD:410383 35/56 (63%)
C1_cPKC_rpt2 98..151 CDD:410386 27/52 (52%)
C2_PKC_alpha_gamma 155..285 CDD:175992 68/129 (53%)
Protein Kinases, catalytic domain 337..659 CDD:473864 184/322 (57%)

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