DRSC/TRiP Functional Genomics Resources

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Protein Alignment inaC and prkcea

DIOPT Version :10

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_005156350.1 Gene:prkcea / 100005075 ZFINID:ZDB-GENE-030131-8191 Length:744 Species:Danio rerio


Alignment Length:658 Identity:258/658 - (39%)
Similarity:374/658 - (56%) Gaps:78/658 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 MKNRLRKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFIWG-FGKQGFQCEECRFNIHQKCCK 115
            |:.|.|:||::|: :..||||:|...:.:.||||.||:||||| .||||:||:.|...:|::|.:
Zfish   154 MRPRKRQGAVRRR-VHQVNGHKFMATYLRQPTYCSHCRDFIWGVLGKQGYQCQVCTCVVHKRCHE 217

  Fly   116 FVVFKCPG----KDTDFDADCAK----VKHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNL 172
            .::.||.|    :||..:....:    :.|.:....|..|||||.||.||.|:..||::|:.|.:
Zfish   218 LIITKCAGMKKQEDTPEEVGSQRFSVNIPHMFSIHNYKVPTFCDHCGSLLWGLMRQGLQCKACKM 282

  Fly   173 NVHHACQETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHP 237
            |||..|:..|.|.||                      ||.::.|.::       ||    :.:.|
Zfish   283 NVHRRCESNVAPSCG----------------------VDARKIAKVL-------SD----LGVTP 314

  Fly   238 DRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQ 302
            |:...:.::.|.:....:|..:.|.....:..||.|.......|....:          .||.::
Zfish   315 DKISNSTQRRKKLTPGQDPQQSTTEAPSSEESDRCKSAPTSPCDQAELA----------ELESIR 369

  Fly   303 KEPVDGWYKFLSQVEGEHYNIPCVDAFNDIARLRDEVRHDRRPNEKRRMDNKDMPHNMSKRDMIR 367
            |.        ||  .|:.:......:.:.:.....|.|           :|.|:....:||  :.
Zfish   370 KA--------LS--FGQEHKSSSSSSCSGVQSTEIEGR-----------ENGDLKTVQTKR--MS 411

  Fly   368 AADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFL 432
            ..||:|:||:||||||||:|||.:||||:||||||:||||:|.||::..:.||:||||:.:.|:|
Zfish   412 LTDFSFIKVLGKGSFGKVMLAELKGTDEVYAVKVLKKDVILQDDDVDCTLTEKRILALARKHPYL 476

  Fly   433 VSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLK 497
            ..:..||||.|||||||||..|||||:.:|:..:|.|:.:.|||.||..||.|||:..:||||||
Zfish   477 TQLFCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEARSRFYAAEVTSALMFLHQHGVIYRDLK 541

  Fly   498 LDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFE 562
            |||||||.|||.||.|||:.|||:....||.||||||:|:||||:....|..:.|||:.|||::|
Zfish   542 LDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYE 606

  Fly   563 FMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLG--AGRYARQEITT 625
            .||||.|||.|:|..:|.:|.....::|...|.||:.|:.:|:||.|:.|||  ..:...:.|..
Zfish   607 MMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPSKRLGCVVTQGLEEAIKV 671

  Fly   626 HPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFS 690
            |||||.:||.:.|...::||.||.||.::|::|||..||:|...|||.|...:..::|.:|.|||
Zfish   672 HPFFREIDWVQLEQRRIKPPFKPRIKTKRDVNNFDQDFTREDPVLTPVDDAIIKQINQEEFKGFS 736

  Fly   691 FMNPEFIT 698
            :...|.::
Zfish   737 YFGEEALS 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 25/52 (48%)
C1 137..190 CDD:412127 24/52 (46%)
C2_PKC_alpha_gamma 194..324 CDD:175992 20/129 (16%)
STKc_PKC 375..692 CDD:270722 168/318 (53%)
prkceaXP_005156350.1 C2_PKC_epsilon 3..135 CDD:175981
C1_nPKC_epsilon-like_rpt1 164..227 CDD:410385 29/63 (46%)
C1_nPKC_epsilon-like_rpt2 245..299 CDD:410388 24/75 (32%)
STKc_nPKC_epsilon 419..739 CDD:270743 168/319 (53%)
Blue background indicates that the domain is not in the aligned region.

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