DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inaC and prkcg

DIOPT Version :9

Sequence 1:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_001921715.1 Gene:prkcg / 100003514 ZFINID:ZDB-GENE-090206-1 Length:695 Species:Danio rerio


Alignment Length:702 Identity:340/702 - (48%)
Similarity:463/702 - (65%) Gaps:32/702 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ATVLPPSVPSAAPGA-KAPAAGAGKGPGNLLEITGEANIVNYMKNRL----RKGAMKRKGLEMVN 70
            :|.:.|| ||.:|.| .:|:..:...|..|..           ..||    ||||:|.|.:..|.
Zfish     2 STPVSPS-PSLSPLALSSPSPSSSPLPSPLSP-----------PPRLPVFQRKGALKHKRVIEVK 54

  Fly    71 GHRFGVRFFKNPTYCGHCKDFIWGFGKQGFQCEECRFNIHQKCCKFVVFKCPGKDTDFDADCAKV 135
            .|:|..||||.||:|.||.|||||.|||||||:.|.|.:|::|.:||.|.|||..|....:..|.
Zfish    55 DHQFTARFFKQPTFCSHCTDFIWGIGKQGFQCQVCSFVVHKRCHEFVTFTCPGAITAPKPEDLKS 119

  Fly   136 KHGWISTTYTTPTFCDECGLLLHGVAHQGVKCENCNLNVHHACQETVPPMCGADISEVRGKLLLY 200
            ||.:...||::|||||.||.||:|:.|||:||..|::|||..|:.:||.:||.|.:|.||::.|.
Zfish   120 KHKFKVHTYSSPTFCDHCGSLLYGLIHQGMKCGCCDMNVHKRCESSVPSLCGQDHTEKRGRIRLT 184

  Fly   201 VELKGNNLKVDIKEAANLIPMDTNGFSDPYIAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFE 265
            |..:..::.:.:.||.||||||.||.||||:.:::.||....:|:|||||:..|||::||:|||.
Zfish   185 VRGEKEDIYITVHEALNLIPMDPNGLSDPYVKLKLIPDPKSHSKQKTKTIRSTLNPIWNESFTFS 249

  Fly   266 LQPQDRDKRLLIEVWDWDRTSRNDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCVDAFN 330
            ::.:..|:||.:|||||||||||||||:.||.:.|:.:..|.||:|.|:|.|||:||||..|.  
Zfish   250 VRGRQWDRRLSVEVWDWDRTSRNDFMGALSFGVSEIFRRSVSGWFKLLNQDEGEYYNIPVPDP-- 312

  Fly   331 DIARLRDEVRHDRRPNEKRRMDN---KDMPHNMSK--------RDMIRAADFNFVKVIGKGSFGK 384
            |: ::.:|:.....|.....:..   ...|..:|.        :..|...||||:.|:|||||||
Zfish   313 DL-QVPEEILMPSIPPTPSPVTTPVPAVTPPALSPAPAVLHTGKGHIGLHDFNFLMVLGKGSFGK 376

  Fly   385 VLLAERRGTDELYAVKVLRKDVIIQTDDMELPMNEKKILALSGRPPFLVSMHSCFQTMDRLFFVM 449
            |||||.:|::.|:|:|:|:|||:.|.:|.|..|.|:::|||||||.||.|::..|||.|||::||
Zfish   377 VLLAEEKGSERLFAIKMLKKDVLFQDEDTESAMVERRVLALSGRPHFLTSLYCAFQTEDRLYYVM 441

  Fly   450 EYCKGGDLMYHMQQYGRFKESVAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDF 514
            ||..|||||:|:|..|:|||..|.|||.|:|:.|||||.:.||||||||||:|||.|||:|:.||
Zfish   442 EYVNGGDLMFHIQIVGKFKEPHAAFYAAEIAVGLFFLHNKGIIYRDLKLDNVLLDSEGHIKIADF 506

  Fly   515 GLSKEGVTERQTTRTFCGTPNYMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDETTVF 579
            |:.:||:.|..|||||||||:|:|||||:|.||..|.||||:||||:|.:|||.||:|.||..:|
Zfish   507 GMCREGMMEGDTTRTFCGTPDYIAPEIVAYQPYGKAVDWWSYGVLLYEMLAGQPPFDGIDEEELF 571

  Fly   580 RNIKDKKAVFPKHFSVEAMDIITSFLTKKPNNRLGAGRYARQEITTHPFFRNVDWDKAEACEMEP 644
            ::|.::...:||..|.||:.|....|||.|..|||.|..|.:|:..|||||.:|||:.|..|::|
Zfish   572 QSIMEQSVSYPKSLSREAVAICKGLLTKNPAKRLGGGEDAERELREHPFFRWIDWDRLERLEIQP 636

  Fly   645 PIKPMIKHRKDISNFDDAFTKEKTDLTPTDKLFMMNLDQNDFIGFSFMNPEF 696
            |.||....:|. .|||..||...:.|||:|...:..::|.:|..|:|||.||
Zfish   637 PFKPRSGGKKG-ENFDKFFTSTSSALTPSDPDVLAAINQEEFQDFTFMNSEF 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
inaCNP_476863.1 C1_1 72..124 CDD:278556 32/51 (63%)
C1_1 137..189 CDD:278556 27/51 (53%)
C2_PKC_alpha_gamma 194..324 CDD:175992 66/129 (51%)
S_TKc 371..629 CDD:214567 150/257 (58%)
STKc_PKC 375..692 CDD:270722 172/316 (54%)
prkcgXP_001921715.1 C1_1 56..108 CDD:278556 32/51 (63%)
C1_1 121..173 CDD:278556 27/51 (53%)
C2_PKC_alpha_gamma 178..308 CDD:175992 66/129 (51%)
S_TKc 363..621 CDD:214567 150/257 (58%)
STKc_cPKC 366..684 CDD:270739 173/318 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583310
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0696
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143719at33208
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103255
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.710

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