DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psi and Igf2bp3

DIOPT Version :10

Sequence 1:NP_995862.1 Gene:Psi / 36889 FlyBaseID:FBgn0014870 Length:797 Species:Drosophila melanogaster
Sequence 2:NP_001359041.1 Gene:Igf2bp3 / 312320 RGDID:1306512 Length:579 Species:Rattus norvegicus


Alignment Length:495 Identity:93/495 - (18%)
Similarity:175/495 - (35%) Gaps:126/495 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 GGGGPGGASITQAIAQAAAVAARLAASAGTSCEEQIRL--PESVAGAFMGRSSNDTITHIQAESG 153
            |..|||....::..:..       :.|....|:..:||  |....||.:|: ...||.:|..::.
  Rat   170 GRRGPGQRGSSRQTSPG-------SVSKQKPCDLPLRLLVPTQFVGAIIGK-EGATIRNITKQTQ 226

  Fly   154 VKVQVMQDQD------RVIMLRGQRDTVTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPP 212
            .|:.|.:.::      .:.:|.....|....:.:::.|...|    .::..|..:|         
  Rat   227 SKIDVHRKENTGAAEKSITILSTPEGTSAACKSILEIMHKEA----QDIKFTEEIP--------- 278

  Fly   213 YQEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELI-----KPLRISGEAQKIEHA 272
             .:|:.....||.:|||.|..:|::::.|..|:.|   .|.|||.     :.:.:.|..:....|
  Rat   279 -LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITI---SPLQELTLYNPERTITVKGNVETCAKA 339

  Fly   273 KQMVLDLIAQK--------------------DAQGQQQGGRGGGGGGGGPGMG----FNNFNNGN 313
            ::.::..|.:.                    :|.|......|......||...    :..|....
  Rat   340 EEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFEQSE 404

  Fly   314 GGESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDDAKR 378
             .|:..:|:|.::||.:|||.|..|:::....|..::....:..:...|..:|.|..:....|:.
  Rat   405 -TETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQG 468

  Fly   379 TIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVPASKCGIVIG 443
            .|.|.|:                        ..|:     |:..:..:.|....||:...|.|||
  Rat   469 RIYGKIK------------------------EENF-----VSPKEEVKLEAHIRVPSFAAGRVIG 504

  Fly   444 RGGETIKLINQQSGAHTEMDRNASNPPNEK-LFKSKGTTDQVEAARQMISEKINMELNVISRKPI 507
            :||:|:..:...|.|...:.|:.:...|:: :.|..|.....:.|::.|.|.:...         
  Rat   505 KGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRKIQEILTQV--------- 560

  Fly   508 GGGPGGGGGNSGGGQNNSHHNQQQGGYGGQNQMQGGDPNS 547
                             ..|.||:.       :|.|.|.|
  Rat   561 -----------------KQHQQQKA-------LQSGAPQS 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsiNP_995862.1 KH_1 123..184 CDD:459630 13/68 (19%)
KH-I_FUBP_rpt2 214..280 CDD:411825 17/70 (24%)
KH-I_FUBP_rpt3 317..384 CDD:411826 16/66 (24%)
KH-I_FUBP_rpt4 428..494 CDD:411827 18/66 (27%)
DUF1897 591..619 CDD:462653
DUF1897 <653..680 CDD:462653
Igf2bp3NP_001359041.1 RRM_SF 1..77 CDD:473069
RRM2_IGF2BP3 81..156 CDD:410039
KH-I_IGF2BP3_rpt1 197..272 CDD:411920 15/79 (19%)
KH-I 275..369 CDD:469614 19/106 (18%)
KH-I_IGF2BP3_rpt3 402..479 CDD:411926 18/101 (18%)
KH-I 487..562 CDD:469614 19/100 (19%)
Blue background indicates that the domain is not in the aligned region.

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