DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fen1 and fen1

DIOPT Version :10

Sequence 1:NP_523765.1 Gene:Fen1 / 36887 FlyBaseID:FBgn0025832 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001017005.1 Gene:fen1 / 549759 XenbaseID:XB-GENE-955518 Length:382 Species:Xenopus tropicalis


Alignment Length:387 Identity:248/387 - (64%)
Similarity:318/387 - (82%) Gaps:7/387 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDPTSHLM 65
            |||.||:|||||:||.||:|.::|.:||||||:|||||:||||||||.:|..|...:|:.|||||
 Frog     1 MGIHGLAKLIADVAPAAIKEHDIKSYFGRKVAVDASMCIYQFLIAVRQDGNMLQNEDGETTSHLM 65

  Fly    66 GMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAATDAGDDAGIEKFNRRL 130
            ||||||||::::|||||||||||||.:||||||||:|||.||||.|:||.:||:...|||||:||
 Frog    66 GMFYRTIRMIEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGEVENIEKFNKRL 130

  Fly   131 VRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTKLLRYLT 195
            |:|||:|.:|.|:||||||||||||||||||.||||||||||||.|||||||||||:..|||:||
 Frog   131 VKVTKQHNEECKKLLTLMGVPYVDAPCEAEATCAALVKAGKVYAAATEDMDALTFGTPVLLRHLT 195

  Fly   196 YSEARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCESIKGIGPKRAIELINTYRDIETIL 260
            .|||:|:|::||..:::::.:.:::.:|:|||||||.||||:|:||||||||:||..::.||.|:
 Frog   196 ASEAKKLPIQEFHLNRVMQDMGVSHEQFVDLCILLGSDYCETIRGIGPKRAIDLIRQHKSIEEIV 260

  Fly   261 DNLDSSKYTVPENWNYKVARELFIEPEVADADSIDLKWVEPDEEGLVKFLCGDRQFNEERVRNGA 325
            ||:|..||.:||||.:|.||:||:||||.|.:|.:|||:||||||||.|:|.::||:|:|:||||
 Frog   261 DNIDLKKYPIPENWLHKEARQLFLEPEVVDTESTELKWIEPDEEGLVAFMCAEKQFSEDRIRNGA 325

  Fly   326 KKLMKSKQAQTQVRLDSFFKTLPSTPNATNAAKRKAEEAKKSANNKKAKTSG--GGRGRRPK 385
            |||.|::|..||.|||.|||...|    .::.|||..|:|.|| .|||||:|  .|:.:|.|
 Frog   326 KKLSKNRQGSTQGRLDDFFKVTGS----ISSTKRKEVESKGSA-KKKAKTAGTPAGKFKRGK 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fen1NP_523765.1 PTZ00217 1..363 CDD:240317 235/361 (65%)
fen1NP_001017005.1 PTZ00217 1..359 CDD:240317 235/361 (65%)
N-domain 1..104 73/102 (72%)
I-domain 122..253 90/130 (69%)
Interaction with PCNA. /evidence=ECO:0000255|HAMAP-Rule:MF_03140 336..344 5/7 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 352..382 15/30 (50%)

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