DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fen1 and crn-1

DIOPT Version :10

Sequence 1:NP_523765.1 Gene:Fen1 / 36887 FlyBaseID:FBgn0025832 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_491168.1 Gene:crn-1 / 171917 WormBaseID:WBGene00000794 Length:382 Species:Caenorhabditis elegans


Alignment Length:385 Identity:232/385 - (60%)
Similarity:290/385 - (75%) Gaps:3/385 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDPTSHLM 65
            |||.|||::|||.||.||:.:|||.||||.|||||||||||||||||.:|:||.:.:|:.|||||
 Worm     1 MGIKGLSQVIADNAPSAIKVNEMKAFFGRTVAIDASMCLYQFLIAVRQDGSQLQSEDGETTSHLM 65

  Fly    66 GMFYRTIRLLDNGIKPVYVFDGKPPDLKSGELAKRAERREEAEKALKAATDAGDDAGIEKFNRRL 130
            ||..||:|:.:||:||||||||||||:|.|||.||:|||.||||||..|.:.||....|||.|||
 Worm    66 GMLNRTVRMFENGVKPVYVFDGKPPDMKGGELEKRSERRAEAEKALTEAKEKGDVKEAEKFERRL 130

  Fly   131 VRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALTFGSTKLLRYLT 195
            |:|||:...|||.||.|||:|.|:||||||||||.|||||||:.|.||||||||||||.|||:..
 Worm   131 VKVTKQQNDEAKRLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTVTEDMDALTFGSTVLLRHFL 195

  Fly   196 YSEARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCESIKGIGPKRAIELINTYRDIETIL 260
            ...|:|:|:|||:....||.:.::..||||||||||||||.:|:|:|||:|:|||..:::|||||
 Worm   196 APVAKKIPIKEFNLSLALEEMKLSVEEFIDLCILLGCDYCGTIRGVGPKKAVELIRQHKNIETIL 260

  Fly   261 DNLDSSKYTVPENWNYKVARELFIEPEVADADSIDLKWVEPDEEGLVKFLCGDRQFNEERVRNGA 325
            :|:|.:||..||:|.||.|||||:.|||...:.::|.|.|.|.||:::||||::.|||||:||..
 Worm   261 ENIDQNKYPPPEDWPYKRARELFLNPEVTKPEEVELTWKEADVEGVIQFLCGEKNFNEERIRNAL 325

  Fly   326 KKLMKSKQAQTQVRLDSFFKTLPSTPNATNAAKRKAEEAKKSANNKKAKTSGGGRGRRPK 385
            .||..|:::.||.|:||||.........|.|.|||||||:|:   ||....||...:|.|
 Worm   326 AKLKTSRKSGTQGRIDSFFGNSTKVTCVTAATKRKAEEAEKA---KKGAKKGGPPKKRAK 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fen1NP_523765.1 PTZ00217 1..363 CDD:240317 222/361 (61%)
crn-1NP_491168.1 PTZ00217 1..351 CDD:240317 216/349 (62%)

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