DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IntS8 and ints-8

DIOPT Version :9

Sequence 1:NP_611162.2 Gene:IntS8 / 36886 FlyBaseID:FBgn0025830 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_001252168.1 Gene:ints-8 / 173216 WormBaseID:WBGene00013021 Length:977 Species:Caenorhabditis elegans


Alignment Length:1184 Identity:225/1184 - (19%)
Similarity:375/1184 - (31%) Gaps:404/1184 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PLAAETVLWFEFLLDPHKITQHLQRPHPEPSAMELIVQFISMTPNTAQESVGTPGSDLQNLNQTP 75
            |.:...|.|||..:||..|::.|..|........|.:||                :|...|.:..
 Worm     4 PESTGDVSWFELFVDPTCISKSLLDPEKRKQLPRLCMQF----------------TDKGFLAERE 52

  Fly    76 SNSGPIPGVVGGAPAPTTPTASGGVGMPHSPQRPAEKGLQLNRKQLALKILELKVATWLKWDLDA 140
            .:.|.:                           ..|:.:...||..::::..:.....|.:|::.
 Worm    53 KDKGKL---------------------------AVEELMLFERKAASMRLCAMATFAALDYDIEF 90

  Fly   141 LEKNLP--VIMQLALLRDLCTISYGCSLSIPLPNDFDARISAAGNERAARFALTIYHRMLLRMQL 203
            :..|:|  .|..|.:|.|.....|.       ..:.||..   ||....||.|:|..|       
 Worm    91 IIDNIPRNEIQTLRVLADNFYRIYN-------EKNLDATF---GNWLFYRFVLSIDRR------- 138

  Fly   204 IKEQALKAPRPQNTMYQTVDQLQQFLDTPTQPSI---EYLQQLCASTKPFYIFHYDSFVP----- 260
               ..|..|.|:.|:..|:...|..   ||.|::   |..|:.....|. ::....:|:.     
 Worm   139 ---NRLAPPAPRATIPTTLSNGQLM---PTDPALLKHEKTQRTIMELKE-HVLKARAFITELAEV 196

  Fly   261 --------LRC----------------------------------DDI----GNGQNYDVMHLIT 279
                    ::|                                  |.:    |:..|..:..|:|
 Worm   197 PRDVVAPGIQCFLKPFVELAPKAMTAAFLGDRNVLIENPSADFEVDKVLLSAGDVSNKCLSELVT 261

  Fly   280 PQELRAQLHYELAQYYLYTK------QYVLAREAAAACNTNLQAIPPQTTLYYCHIRPSELEGLL 338
                           :|:|.      :.:|.|.........|.||.......||.|        |
 Worm   262 ---------------FLFTSGELQEAKKILTRVVKPTVTHPLVAIDETIFKSYCQI--------L 303

  Fly   339 QACGISAEEQSLLEKFQQSLLNNYT-DIVSILRMDNRRREIPFISRRQVELDIEGSISTGILKET 402
            .|.|......:.    ..|||..|. |:.|:.....||.|:  :..|            |:.:.|
 Worm   304 NAQGTPYSSSTA----SSSLLKPYVFDLNSLNDEKMRRSEV--LRHR------------GVQETT 350

  Fly   403 VQLQLQVAALNVVRNIFEWGSIFGSVEYFEKYRELDCLPPLVEALQEMLPHCTFKEQAALKHFLI 467
            .|||....|.|...::.:        |:.|..||                  :.:.:|.::.| :
 Worm   351 GQLQNVYLAENAALSVID--------EHPECIRE------------------SIRNRAEIERF-V 388

  Fly   468 DCLLHQ--GGQSRQLLQTVRG---FGLFSSDELQDIDE----------------QMLQATPPVPT 511
            ..|..:  |.:.::.|..:|.   :...|..:|:||.|                :.|:..||...
 Worm   389 KVLKRKTDGIRDKRKLAAIRAHLQYLCASISDLRDILETNGMDVSQLRTFAVPSEHLKLEPPPAF 453

  Fly   512 NSLASLSDWMCHSKMSRVDVGALERQLISCTNANTVRILLVKLCATAPGKPLWAINPSWDVPQ-- 574
            :.|..|...              ||::.:....:|..|..:.....| ..|.|.|...:|:|.  
 Worm   454 HVLEELVSG--------------ERKIDAAQGPSTHEISRIFPLPRA-ADPYWIIMTEYDIPTLQ 503

  Fly   575 -----------PLKTLIMAMPVSFLQ-----------DFSYVLLGKARELATRGNYIDAVSMLSV 617
                       |.|   |.:|...::           :...:||.|..:|:...::.....:||:
 Worm   504 NALTKLGPFWFPTK---MQVPEHLMEKLEKHSNLPTYNLHRLLLCKIDQLSKMHHFEKFKDVLSL 565

  Fly   618 ----LKSENQRQEMAANVQ-------LMCKLITWEILHIQ----ITQCL-EEWHQKPLDLQSLGG 666
                ||..::...|.|..:       ::.:...||...::    .||.: ...|..|.|..:  |
 Worm   566 ALHSLKLVHESWVMTAAFEMIQVPAIIVNQQFAWERHSLERDFAQTQLIFNSDHFVPNDYSA--G 628

  Fly   667 RCKQCLGALQAGDSIVPRPDILESCAIMLLNLTEFPPLLYLDKRAGPLEL------PLA--FAAT 723
            ...:|||                    :::|:.:...:|   ::.|.|.:      |:|  |.|.
 Worm   629 MINECLG--------------------LMINIGDAQSVL---EKGGQLSMERFKSVPIARMFGAY 670

  Fly   724 FIEMEKMKGPKKVCRDAWELMLSMFLNV-PKRGSSGVGGISSLQAFL-------------QRIRH 774
            .:........||.....|..:....|.. |.||..  .|....||.|             ..||.
 Worm   671 LVNYSDPATRKKCADGFWRTVTQRLLEAQPPRGFR--RGNEVEQALLVTRKELADLFHLFSLIRD 733

  Fly   775 QSV--FGLAIS-------MIG------KVHNILKD----DPNHDLSCEYMQLWPTSINNPVSYSL 820
            |.|  |.||.:       :||      |:|..|.|    |||..         ...|:||     
 Worm   734 QRVVDFLLAYAVCLHNKVVIGQRKSNLKIHAKLLDLYTPDPNAP---------KIDISNP----- 784

  Fly   821 RSVCETLQWLLSEALSYYPQTISWLKMKGDLDLAIGNNESAMRCYVNALVTGTDYCT--MPLQR- 882
            ..|.:.||.::.:|.|..|.....::...|......:.:.|.:.|:       :|.|  .|..| 
 Worm   785 DDVRQLLQLMVEKAYSLSPTDPDTIRTYADFLYVERDFQGAAQKYM-------EYFTAHSPTLRL 842

  Fly   883 ------NVADDYVIRKMIRCAANLGCHMQATVLCQFLDEIDYGIVFKNLSEKSSNFTDAMDAYYS 941
                  .|.||.|::::..|.||.|....:.:.||:|.........|.::....|  :..|...:
 Worm   843 SPFDAFTVFDDTVVQRLRYCTANAGYLTMSLLTCQWLKVGKTNAYQKAMAVLEHN--ETRDVGAN 905

  Fly   942 C---IWDTTLLEFIVNLHAKRGEHSRKLEAISMMGTL-----ELNANNN-------EEIKRESAM 991
            |   :.|...:|.:       .:|...:.....:.||     .|:||.|       :||.|    
 Worm   906 CADYVTDVVAIELL-------SQHYHSMMMTKSLDTLYTGANSLSANKNVPQVLATQEINR---- 959

  Fly   992 VRKSRFLRALAKQY 1005
             |.::||.||:..|
 Worm   960 -RTTKFLTALSSIY 972



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167086
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46381
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106555
Panther 1 1.100 - - LDO PTHR13350
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3335
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.970

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