Sequence 1: | NP_001246376.1 | Gene: | CG5550 / 36883 | FlyBaseID: | FBgn0034160 | Length: | 250 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112638.2 | Gene: | Fcna / 83517 | RGDID: | 621221 | Length: | 335 | Species: | Rattus norvegicus |
Alignment Length: | 219 | Identity: | 88/219 - (40%) |
---|---|---|---|
Similarity: | 117/219 - (53%) | Gaps: | 27/219 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 YKKYSSSCKELNPKKSGVQKIQVGSDVIEVYCDVTIAGKGWLVVQRRVSVEENFYRNWTSYQTGF 96
Fly 97 GDLKGNFFIGLNNLNKISSLQPQELYIELVDFAGEKRYAHYSVFHVGNVYSNYPITQLGAY-SGT 160
Fly 161 AGDSLSYHLYQPFSTFDRDND-NATINCAARYMGAWWYRECLSRIPCSNLNGAYLGGNHTDPALF 224
Fly 225 GSGIVWGEWKGFTYSYKTVNIMVR 248 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5550 | NP_001246376.1 | FReD | 34..250 | CDD:238040 | 87/217 (40%) |
Fcna | NP_112638.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 47..114 | ||
Collagen | <67..108 | CDD:396114 | |||
FReD | 123..333 | CDD:238040 | 87/217 (40%) | ||
A domain, contributes to trimerization. /evidence=ECO:0000250 | 123..162 | 8/38 (21%) | |||
B domain, contributes to trimerization. /evidence=ECO:0000250 | 163..251 | 35/88 (40%) | |||
Carbohydrate-binding. /evidence=ECO:0000250|UniProtKB:O00602 | 291..293 | 0/1 (0%) | |||
P domain. /evidence=ECO:0000250|UniProtKB:O00602 | 326..335 | 2/8 (25%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2579 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000029 | |
OrthoInspector | 1 | 1.000 | - | - | mtm12326 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X25 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.810 |