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Protein Alignment CG5550 and LOC594984
DIOPT Version :9
| Sequence 1: | NP_001246376.1 |
Gene: | CG5550 / 36883 |
FlyBaseID: | FBgn0034160 |
Length: | 250 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001025596.1 |
Gene: | LOC594984 / 594984 |
-ID: | - |
Length: | 318 |
Species: | Xenopus tropicalis |
| Alignment Length: | 192 |
Identity: | 78/192 - (40%) |
| Similarity: | 112/192 - (58%) |
Gaps: | 7/192 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 59 IEVYCDVTIAGKGWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFIGLNNLNKISSLQPQELYI 123
:.|:||:...|.||:|.|||.....:|::.|.||:.|||.....|::|..||:.:::....:|.:
Frog 133 LPVFCDMETDGGGWIVFQRRKDGSVDFFQEWDSYKRGFGRQDSEFWLGNENLHLLTATGNFQLRV 197
Fly 124 ELVDFAGEKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYHLYQPFSTFDRDNDNATINCA 188
:|:||...:.:|.||.|.:|....||.::..|...|.||||||.|..:.||:.|||||::..:||
Frog 198 DLMDFDSNRTFASYSNFRIGGESRNYTLSLGGFTGGDAGDSLSGHKNREFSSKDRDNDSSPTSCA 262
Fly 189 ARYMGAWWYRECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEWKGFTYSYKTVNIMVRPK 250
.||.|||||..|.: |||||.||||.| ..|.:|:.|....|:.||||...:..||:
Frog 263 ERYKGAWWYSGCHT----SNLNGLYLGGKH---GSFANGVNWKSGGGYNYSYKVSEMKFRPQ 317
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG5550 | NP_001246376.1 |
FReD |
34..250 |
CDD:238040 |
77/190 (41%) |
| LOC594984 | NP_001025596.1 |
Collagen |
42..99 |
CDD:189968 |
|
| FReD |
107..316 |
CDD:238040 |
76/189 (40%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
1 |
1.050 |
171 |
1.000 |
Inparanoid score |
I3986 |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000029 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm14088 |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
0 | 0.000 |
Not matched by this tool. |
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
1 |
1.000 |
- |
- |
|
X25 |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.050 |
|
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