DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5550 and fgg

DIOPT Version :9

Sequence 1:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_998219.1 Gene:fgg / 406327 ZFINID:ZDB-GENE-040426-1998 Length:431 Species:Danio rerio


Alignment Length:267 Identity:80/267 - (29%)
Similarity:125/267 - (46%) Gaps:35/267 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SLGLFYLASAEIGENVKIQTYKKYSSSCKEL---NPKKSGVQKIQV--GSDVIEVYCDVTIAGKG 71
            |:.|..:......:.|:|||..  ...|:::   ..|.||:..::.  ..:...|||::...|:|
Zfish   148 SMQLDQMCKEPCKDTVEIQTVT--GKDCQDIANKGGKVSGLYYVKPARAPEAFLVYCEIDSFGRG 210

  Fly    72 WLVVQRRVSVEENFYRNWTSYQTGFG----DLKGNFFIGLNNLNKIS--SLQPQELYIELVDFAG 130
            |.|:|||.....:|.:||..|:.|||    |.:..|::|...::.:|  |..|..|.||:||:.|
Zfish   211 WTVLQRRRDGSVDFSKNWIQYKEGFGYLSPDDRTEFWLGNEKIHLLSVQSSVPYVLRIEMVDWEG 275

  Fly   131 EKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSL--------------SYHLYQPFSTFDRDND 181
            .|:||.|:.|.:|.....|.:|....:.|.|||:.              :.|....|||.|||||
Zfish   276 NKKYADYATFKLGPEVDAYRLTYAYYFGGDAGDAFDGYDFGDDPSDKFYTSHNGMQFSTVDRDND 340

  Fly   182 NATINCAARYMGAWWYRECLSRIPCSNLNGAYL-GGNHTD---PALFGSGIVWGEWKGFTYSYKT 242
            ....:||.:....||...|    ..::|||.|. ||.:|:   .:.:.:||:|..|....||.|.
Zfish   341 KFQGHCAQQDGSGWWMNRC----HAAHLNGKYYQGGKYTEKDAESGYDNGIIWATWHSRWYSLKE 401

  Fly   243 VNIMVRP 249
            ..:.:.|
Zfish   402 TTMKIIP 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5550NP_001246376.1 FReD 34..250 CDD:238040 74/245 (30%)
fggNP_998219.1 Fib_alpha 32..166 CDD:285864 3/17 (18%)
FReD 169..409 CDD:238040 74/246 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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