DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5550 and ANGPTL3

DIOPT Version :10

Sequence 1:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_055310.1 Gene:ANGPTL3 / 27329 HGNCID:491 Length:460 Species:Homo sapiens


Alignment Length:205 Identity:69/205 - (33%)
Similarity:99/205 - (48%) Gaps:10/205 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SGVQKIQ-VGSDVIEVYCDVTIAGKGWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFIGLNNL 110
            ||:..|: ..|.|..||||| |:|..|.::|.|:...:||...|.:|:.|||.|.|.|::||..:
Human   257 SGMYAIRPSNSQVFHVYCDV-ISGSPWTLIQHRIDGSQNFNETWENYKYGFGRLDGEFWLGLEKI 320

  Fly   111 NKISSLQPQELYIELVDFAGEKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYHLYQPFST 175
            ..|.......|.|||.|:...|.|..|| |::||..:||.: .|.|.:|...:::..:....|||
Human   321 YSIVKQSNYVLRIELEDWKDNKHYIEYS-FYLGNHETNYTL-HLVAITGNVPNAIPENKDLVFST 383

  Fly   176 FDRDNDNATINCAARYMGAWWYR-ECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEWKGFTYS 239
            :|. ......||...|.|.||:. ||..    :||||.|.............|:.|....|..||
Human   384 WDH-KAKGHFNCPEGYSGGWWWHDECGE----NNLNGKYNKPRAKSKPERRRGLSWKSQNGRLYS 443

  Fly   240 YKTVNIMVRP 249
            .|:..:::.|
Human   444 IKSTKMLIHP 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5550NP_001246376.1 FReD 34..250 CDD:238040 69/205 (34%)
ANGPTL3NP_055310.1 GumC <81..>205 CDD:442439
FReD 243..453 CDD:238040 68/203 (33%)
Blue background indicates that the domain is not in the aligned region.

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