DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5550 and Angptl2

DIOPT Version :9

Sequence 1:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_598253.2 Gene:Angptl2 / 171100 RGDID:620004 Length:493 Species:Rattus norvegicus


Alignment Length:228 Identity:79/228 - (34%)
Similarity:126/228 - (55%) Gaps:20/228 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SSSCKELNPKKSGVQKIQVG--------------SDVIEVYCDVTIAGKGWLVVQRRVSVEENFY 86
            ||:.|...|.:..:|.::.|              :.:::|:||......||.|:|||:....||:
  Rat   266 SSTDKPSGPWRDCLQALEDGHSTSSIYLVKPENTNRLMQVWCDQRHDPGGWTVIQRRLDGSVNFF 330

  Fly    87 RNWTSYQTGFGDLKGNFFIGLNNLNKISSLQPQELYIELVDFAGEKRYAHYSVFHVGNVYSNYPI 151
            |||.:|:.|||::.|.:::||.|:..:::....:|.:.:.|::|.|.:|.|:.|.: ...|.|..
  Rat   331 RNWETYKQGFGNIDGEYWLGLENIYWLTNQGNYKLLVTMEDWSGRKVFAEYASFRL-EPESEYYK 394

  Fly   152 TQLGAYSGTAGDSLSYHLYQPFSTFDRDNDNATINCAARYMGAWWYRECLSRIPCSNLNGAYLGG 216
            .:||.|.|.||||.::|..:.|:|.|||:|..|.|||....|.|||..|..    |||||.:..|
  Rat   395 LRLGRYHGNAGDSFTWHNGKQFTTLDRDHDVYTGNCAHYQKGGWWYNACAH----SNLNGVWYRG 455

  Fly   217 NHTDPALFGSGIVWGEWKGFTYSYKTVNIMVRP 249
            .|. .:.:..|:.|.|::|.:||.|.|.:|:||
  Rat   456 GHY-RSRYQDGVYWAEFRGGSYSLKKVVMMIRP 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5550NP_001246376.1 FReD 34..250 CDD:238040 79/228 (35%)
Angptl2NP_598253.2 t_SNARE 156..>206 CDD:197699
FReD 273..487 CDD:238040 74/219 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm12326
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X25
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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