DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5550 and si:zfos-2330d3.6

DIOPT Version :9

Sequence 1:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_009294456.1 Gene:si:zfos-2330d3.6 / 103909555 ZFINID:ZDB-GENE-110411-23 Length:242 Species:Danio rerio


Alignment Length:252 Identity:91/252 - (36%)
Similarity:135/252 - (53%) Gaps:23/252 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LCVFSLGLFYLASAEIGENVKIQTYKKYSSSCKEL---NPKKSGVQKI-QVGSDVIEVYCDVTIA 68
            :.||.:.|..:.:|.:     :..:|.:  .|.|:   ....|||..| ..|:....|||.:..:
Zfish     2 MTVFVVALLSVFTASV-----VSGFKPF--DCSEIYKSGKTLSGVYSIYPAGNIPASVYCQMISS 59

  Fly    69 GK-----GWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFIGLNNLNKISSLQPQELYIELVDF 128
            ||     ||.|.|||:....||:|.|..|:.|||:::|.:::||.||.:::..:...|.::|.||
Zfish    60 GKGGENGGWTVFQRRMDGSVNFFRPWEEYKRGFGNVEGEYWLGLENLYQLTRHKKFMLRVDLEDF 124

  Fly   129 AGEKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYHLYQPFSTFDRDNDNATINCAARYMG 193
            .|.|.:|.||.|.||:....|.:...|..:|.|||||.||....|:|:|:|.|..|.|||..|:|
Zfish   125 EGRKGFAQYSSFSVGSEAEGYKLQVSGFTNGGAGDSLIYHSGMKFTTYDKDQDTHTQNCARIYVG 189

  Fly   194 AWWYRECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEWK-GFTYSYKTVNIMVRP 249
            |:||::|.:    :|.||.||||.  |..||..|.||..|| .|....|.:.:.::|
Zfish   190 AFWYKDCHN----ANPNGVYLGGE--DKTLFAIGNVWYTWKNNFEIGMKFITMKIKP 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5550NP_001246376.1 FReD 34..250 CDD:238040 86/226 (38%)
si:zfos-2330d3.6XP_009294456.1 FReD 23..241 CDD:238040 86/226 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D405297at33208
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 1 1.000 - - mtm6504
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.020

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