DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5550 and mfap4.8

DIOPT Version :9

Sequence 1:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_003197840.1 Gene:mfap4.8 / 100538028 ZFINID:ZDB-GENE-121214-168 Length:243 Species:Danio rerio


Alignment Length:253 Identity:85/253 - (33%)
Similarity:127/253 - (50%) Gaps:23/253 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ALCVFSLGLFYLASAEIGENVKIQTYKKYSSSCKEL---NPKKSGVQKIQVGSDV-IEVYCDVTI 67
            |:.||.:.|..:.:|.:     :..:|.:  .|.|:   ....||:..|....|. :.|||.:..
Zfish     2 AMTVFVVALLSVFTASV-----VSGFKPF--DCSEIYKSGQTVSGIYSIYPAGDTPVWVYCQMVS 59

  Fly    68 AGK-----GWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFIGLNNLNKISSLQPQELYIELVD 127
            .||     ||.|.|||:....:|::.|..|:.|||..:|.:::||.||.:::..:...|.::|.|
Zfish    60 DGKVEENEGWTVFQRRMDGSIHFFQLWEKYRIGFGTTEGEYWLGLENLYQLTRHKKFMLRVDLED 124

  Fly   128 FAGEKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYHLYQPFSTFDRDNDNATINCAARYM 192
            |.|.:.:|.||.|.||:....|.:...|...|.||||||||....|||:|||.|....|||...:
Zfish   125 FTGRRGFAQYSSFSVGSEVEGYKLELSGFTDGGAGDSLSYHNGMKFSTYDRDQDTNEDNCARMRL 189

  Fly   193 GAWWYRECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEWKGFTYS-YKTVNIMVRP 249
            ||:||:.|    ..:|.||.||.|.  |.:..|..|.|..||....: .|.:.:.::|
Zfish   190 GAFWYKGC----NYANPNGVYLWGE--DKSKNGIAINWYTWKNDNETPMKFITMKIKP 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5550NP_001246376.1 FReD 34..250 CDD:238040 79/226 (35%)
mfap4.8XP_003197840.1 FReD 24..242 CDD:238040 79/226 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D405297at33208
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.920

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