DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5550 and angptl4

DIOPT Version :10

Sequence 1:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_002938598.2 Gene:angptl4 / 100492339 XenbaseID:XB-GENE-481750 Length:457 Species:Xenopus tropicalis


Alignment Length:241 Identity:81/241 - (33%)
Similarity:114/241 - (47%) Gaps:28/241 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ASAEIGENVKIQTYKKYSSSCKEL---NPKKSGVQKIQ-VGSDVIEVYCDVTIAGKGWLVVQRRV 79
            :|.|.|::|       :.|.|.::   ..|.||:..|| .|:...||||::| |..||.|.|||.
 Frog   228 SSTEEGKHV-------FPSDCHQIFLEGKKSSGIFSIQPSGAQPFEVYCEMT-ADAGWTVTQRRT 284

  Fly    80 SVEENFYRNWTSYQTGFGDLKGNFFIGLNNLNKISSLQPQELYIELVDFAGEKRYAHYSV-FHVG 143
            ....:|.|.|.:|..|||:|.|.|::||..:::|:......::|:|.|:  |....|... |.:.
 Frog   285 DGSVDFDRLWDAYTDGFGNLNGEFWLGLEKMHQITQQGQYLIHIDLQDW--ENNVQHMEAKFLLA 347

  Fly   144 NVYSNYPITQLGAYSGTAGDSLSYHLYQPFSTFDRDND-NATINCAARYMGAWWYRECLSRIPCS 207
            .....|.:..||..:|...::||......|||.|||.| .:..|||....|.||:..|    ..|
 Frog   348 GSNEAYALQLLGPVTGELENALSDFQQLQFSTRDRDQDKKSDFNCAKHLSGGWWFSSC----GHS 408

  Fly   208 NLNGAYL----GGNHTDPALFGSGIVWGEWKGFTYSYKTVNIMVRP 249
            ||||.|.    ...|...    .||.|..|||..|..|:.:|.:||
 Frog   409 NLNGKYFLSVPRARHERK----QGIFWKTWKGRYYPLKSTSIKIRP 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5550NP_001246376.1 FReD 34..250 CDD:238040 77/226 (34%)
angptl4XP_002938598.2 Smc <58..>232 CDD:440809 1/3 (33%)
FReD 237..451 CDD:238040 77/225 (34%)

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