DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5550 and XB5913531

DIOPT Version :9

Sequence 1:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_012826224.3 Gene:XB5913531 / 100488177 XenbaseID:XB-GENE-5913532 Length:255 Species:Xenopus tropicalis


Alignment Length:262 Identity:80/262 - (30%)
Similarity:118/262 - (45%) Gaps:33/262 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LCVFSLGLFYLASAEIGENVKIQT---YKKYSSSCKELNPK---KSGVQKI--QVGSDVIEVYCD 64
            |.:..:|...|.|..|.::..:.|   :|.....|::|..|   ..|...|  |.....:.||||
 Frog     4 LLLILIGPLSLISPIISQSESLDTLVLHKIPPLDCQDLWDKGFRSDGEYLIYPQGPQHPLPVYCD 68

  Fly    65 VTIAGKGWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFIGLNNLNKISSLQPQELYIELVDFA 129
            :|..|..|.|.|:|.....:|.:||..|..|||:....:::||.|:.:::.....||.:||.:|.
 Frog    69 MTTNGMPWTVFQKRFDGSTDFNQNWQDYVMGFGNADYEYWLGLQNIQRLTMTGRYELRVELENFN 133

  Fly   130 GEKRYAHYSVFHVG----NV-YSNYPITQLGAYSGTAGDSLSYHLYQPFSTFDRDNDNATINCAA 189
            |:|.||.||.|.:.    |. :..|.:...|...|.||||||.|:.|.|||:|.|..|...|||.
 Frog   134 GQKVYAFYSNFSLSPQALNAEHDGYKLYVDGFTDGGAGDSLSVHVGQRFSTYDNDQINDIQNCAE 198

  Fly   190 RYMGAWWY--RECLSRIPCSNLNGAYLGGN------HTDPALFGSGIVWGEWKGFTYSYKTVNIM 246
            .:.|.:||  ..|..    :.||..|:..|      |        |..|..|..:..:.:...:|
 Frog   199 YWGGGFWYYSNGCAD----AGLNARYINPNTLKSPQH--------GFSWVTWVEYPETLRASQMM 251

  Fly   247 VR 248
            :|
 Frog   252 MR 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5550NP_001246376.1 FReD 34..250 CDD:238040 73/233 (31%)
XB5913531XP_012826224.3 FReD 33..255 CDD:238040 73/233 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.