DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG5550 and LOC100007488

DIOPT Version :9

Sequence 1:	NP_001246376.1	Gene:	CG5550 / 36883	FlyBaseID:	FBgn0034160	Length:	250	Species:	Drosophila melanogaster
Sequence 2:	NP_001315007.1	Gene:	LOC100007488 / 100007488	-ID:	-	Length:	245	Species:	Danio rerio

Alignment Length:	208	Identity:	78/208 - (37%)
Similarity:	111/208 - (53%)	Gaps:	12/208 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    47 SGVQKIQVGSDV-IEVYCDVTIAGK-----GWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFI 105
            ||:..|....|. :.|||.:...||     ||.|:|||:....||||.|..|:.|||.::|.:::
Zfish    41 SGIYSIYPAGDFPVWVYCQMVSEGKDEDKGGWTVIQRRMDGSVNFYRPWRDYKRGFGKVEGEYWL 105

  Fly   106 GLNNLNKISSLQPQELYIELVDFAGEKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYHLY 170
            ||.||.:::..:...|.::|.||.|.:.:|.||.|.||.....|.:...|...|.|||.||.|..
Zfish   106 GLENLYQLTRHKKFMLRVDLEDFEGRRGFAQYSSFSVGCECEGYKLQVSGFTDGGAGDCLSGHND 170

  Fly   171 QPFSTFDRDNDNATINCAARYMGAWWYRECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEWKG 235
            ..|||||:|.|....:||..|:|.:||..|.:    :|.||.||.|.  ||..:..|:.|..||.
Zfish   171 LKFSTFDKDQDTHEKSCAKEYLGGFWYGSCHN----TNPNGVYLWGE--DPTHYAIGVCWSTWKN 229

  Fly   236 FTYSYKTVNIMVR 248
            :..|.||.::.::
Zfish   230 YAVSMKTFSMKIK 242

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5550	NP_001246376.1	FReD	34..250	CDD:238040	78/208 (38%)
LOC100007488	NP_001315007.1	FReD	25..244	CDD:238040	78/208 (38%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D405297at33208
OrthoFinder	1	1.000	-	-		FOG0000029
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR19143
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X25
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	6	6.020