DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5550 and fgl1

DIOPT Version :10

Sequence 1:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_001923586.2 Gene:fgl1 / 100003029 ZFINID:ZDB-GENE-130815-1 Length:307 Species:Danio rerio


Alignment Length:247 Identity:92/247 - (37%)
Similarity:125/247 - (50%) Gaps:36/247 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YLASAEIGENVKIQTYKKYSSSCKELNPKKSGVQKIQVGSDVIEVYCDVTIAGKGWLVVQRRVSV 81
            |:..|:|.:|      ...||....:.|.:|..:        :.|:||:| .|.||.:.|||...
Zfish    75 YMDCAQIFKN------GSTSSGFYMIKPLRSPTR--------VRVFCDMT-EGGGWTLFQRRSDG 124

  Fly    82 EENFYRNWTSYQTGFGDLK---GNFFIGLNNLNKISSLQPQELYIELVDFAGEKRYAHYSVFHVG 143
            ..:|.|:|..|:.||||:|   |.|::|.:||:.::|.....|.|.|.||.|..|:|.|..|.|.
Zfish   125 SLSFDRDWNDYKIGFGDMKSANGEFWLGNDNLHYLTSQGDYTLRINLEDFEGTHRFAVYRNFKVD 189

  Fly   144 NVYSNYPITQLGAYSGTAGDSLS-----------YHLYQPFSTFDRDNDNATINCAARYMGAWWY 197
            |...:|.: |.|.|||||||:||           .|....|||.|||:|....|||....|.||:
Zfish   190 NEEKHYQL-QFGMYSGTAGDALSGSFHPEVQWWASHQGMKFSTRDRDHDRYDRNCAQEDKGGWWF 253

  Fly   198 RECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEWKGFTYSYKTVNIMVRP 249
            ..|.|    :||||.|..|.::  |....||||..|.|:.||.|:|.:.:||
Zfish   254 NRCHS----ANLNGFYHRGAYS--ASTDDGIVWYPWHGWWYSLKSVQMKIRP 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5550NP_001246376.1 FReD 34..250 CDD:238040 88/230 (38%)
fgl1XP_001923586.2 FReD 74..299 CDD:238040 90/245 (37%)

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