DRSC/TRiP Functional Genomics Resources

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Protein Alignment RalGPS and LTE1

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_009378.1 Gene:LTE1 / 851209 SGDID:S000000022 Length:1435 Species:Saccharomyces cerevisiae


Alignment Length:458 Identity:94/458 - (20%)
Similarity:182/458 - (39%) Gaps:95/458 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SEISRDLSTDNLRYSELSRKPTTDYNGYTGQAYAATQFKQSSPPPPPSQQQQQPTRVSKQRSPNT 69
            ||.:.::|...|...::....|:.... |.:|.:.:.|       ..|..::....::.....:.
Yeast   996 SETNSNISGSVLTMDDIDINDTSSARN-TRRANSESAF-------TGSLNKKNLNEIANMLDDSI 1052

  Fly    70 NGSAHTMACLRQEKTYKEQQMEPPSMQPQASKTLNIKSTRRKNSIGCLN-----SFSSSPDS--- 126
            |....|:|.::.|.||::...:|.:  .::|..:.||:::..:.:..||     ||.:||..   
Yeast  1053 NDDPITVALMKLEGTYEKIPEKPEN--TKSSDAIGIKTSKLADEVEMLNLNNLPSFQNSPAEKRK 1115

  Fly   127 ----PGCYYTIAASAAPPSKSQ------SLPAHASIK-QLDAVILSA------------------ 162
                .....||......|.:|:      |.|....:. .:|..:.:|                  
Yeast  1116 SLLIERRRQTIMNIPFTPDQSEKEGFTSSSPEKIDVSANVDVAVQAAQIQELIGQYRIHDSRLMI 1180

  Fly   163 ----LRVPADVL------ANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTK----- 212
                ..||..::      |.|:||::..:..:|...:|...    |.|| ..|.::::.:     
Yeast  1181 SNNESHVPFILMYDSLSVAQQMTLIEKEILGEIDWKDLLDL----KMKH-EGPQVISWLQLLVRN 1240

  Fly   213 -----------RFNHTSFWTVQEILNAEQPKQRAEIITHFIKVAKKLHELNNLHSLFAIISAMQS 266
                       |||.|..|.:.|||..:..|.:..:|..||.||.......|.::|..||.|:.|
Yeast  1241 ETLSGIDLAISRFNLTVDWIISEILLTKSSKMKRNVIQRFIHVADHCRTFQNFNTLMEIILALSS 1305

  Fly   267 ASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDNWANLRSYLESLR--LPCIPYLGLFLTDLIYID 329
            :.:.:.|..|..:...|...::.|..|.|...|::.:|:.|.|:.  :.|:|::.::|:||    
Yeast  1306 SVVQKFTDAWRLIEPGDLLTWEELKKIPSLDRNYSTIRNLLNSVNPLVGCVPFIVVYLSDL---- 1366

  Fly   330 LAHPHKGGLEPEQR---RNKMNNILRVISNYQQ-----SNYKHLQKHEATQK--YLTSIRYIEEL 384
            .|:..|.....|.:   .||.:..::::.|:.|     ..|.....||...|  |::::.. ||:
Yeast  1367 SANAEKKDWILEDKVVNYNKFDTNVQIVKNFIQRVQWSKFYTFKVNHELLSKCVYISTLTQ-EEI 1430

  Fly   385 QNI 387
            ..:
Yeast  1431 NEL 1433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 46/189 (24%)
PH_RalGPS1_2 578..692 CDD:270120
LTE1NP_009378.1 RasGEFN 28..156 CDD:214571
RasGEF 1190..1434 CDD:238087 59/254 (23%)
Blue background indicates that the domain is not in the aligned region.

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