DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5522 and Rgl3

DIOPT Version :9

Sequence 1:NP_725613.1 Gene:CG5522 / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_076111.2 Gene:Rgl3 / 71746 MGIID:1918996 Length:709 Species:Mus musculus


Alignment Length:507 Identity:133/507 - (26%)
Similarity:207/507 - (40%) Gaps:112/507 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TGQAYAATQ----FKQSSPPPPPSQQQQQPTRVSKQRS--PNTNGSAHTMACL----RQEKTYKE 87
            |.:|:..|.    |....|||||    ..|..|..:|:  .:.|.|.:..|.:    ...:.:.:
Mouse    98 THRAFVPTARVLGFLLPPPPPPP----PPPAGVDSKRTEGQDLNFSKNLRAVVSVLGSWLRNHPQ 158

  Fly    88 QQMEPPSMQ-------------------PQASKTLNI-------KSTRRKNSIGCLNSFSSSP-- 124
            ...:||..|                   .:|.|.|..       :.|..:..:    ::|..|  
Mouse   159 DFRDPPDHQNLGNVRIFLGWAAPGGAEAREAEKLLEDFLKEAKGEQTEEEKRL----AWSGPPRI 219

  Fly   125 -DSPGCYYT--IAASAAPPSKSQSLPAHASIKQLDAVILSALRVPADVLANQITLLDFPVFAQIQ 186
             .:||..:.  ......|.|:...|                |....|.:|.|:||:|..:|.:::
Mouse   220 AQTPGSEFAEDCVEEEGPSSEGPEL----------------LDFSVDDVAEQLTLMDVELFLRVR 268

  Fly   187 PDELSSCAWTKKDKHVN---TPNIVAFTKRFNHTSFWTVQEILNAE--QPKQRAEIITHFIKVAK 246
            ..|.....|:::|:...   :|.:.|...:||..:...:..:|.|.  ...|||:.|..:|::|:
Mouse   269 SCECLGSMWSQRDRPGAAGISPTVRATVAQFNTVTGCVLGSVLAAPGLAASQRAQRIEKWIRIAQ 333

  Fly   247 KLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDNWANLRSYLE--- 308
            :..||.|..||.||:||:||..||||.::|..:|::..:.|.:||.||||:||..:.|:.|.   
Mouse   334 RCRELRNFSSLRAILSALQSNPIYRLKRSWGAVSREPLSVFRKLSQIFSDEDNHLSSRAILSQEE 398

  Fly   309 --------SLRLPC------IPYLGLFLTDLIYIDLAHPH--KGGLEPEQRRNKMNNILRVISNY 357
                    |..||.      :||||.|||||:.:|.|.|.  ||.|...::|.|...||..|...
Mouse   399 TTEDDDCPSGSLPSKLPPGPVPYLGTFLTDLVMLDTALPDTLKGNLINFEKRRKEWEILARIQQL 463

  Fly   358 QQSNYKHLQKHEATQK--YLTSIRYIEELQNIFEEDQYKRSLNLEPASPSGPSSSSCSSKESFNV 420
            ||    ..|::..:.:  .|.::|...:|.   ||..|:.|..:||.:.|.|||.....:.|...
Mouse   464 QQ----RCQRYSLSPRPPILAALRAQRQLS---EEQSYRVSRVIEPPAASCPSSPRIRRRISLTK 521

  Fly   421 EVVTPALGCLNLSPAKTIGSMRMASGTKFV-PGHRKCRSLGTKFRSSSLPRN 471
            .:........|.||..:.|.  .:|.|..| ||           ...|.|||
Mouse   522 RLSAKLSREKNSSPGGSPGD--PSSPTSSVSPG-----------SPPSSPRN 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5522NP_725613.1 RasGEF 163..400 CDD:214539 84/262 (32%)
PH_RalGPS1_2 578..692 CDD:270120
PH 578..685 CDD:278594
Rgl3NP_076111.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..55
REM 73..199 CDD:100121 21/104 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..225 4/25 (16%)
RasGEF 244..503 CDD:214539 86/281 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..416 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 502..604 19/72 (26%)
Interaction with HRAS, MRAS and RIT1. /evidence=ECO:0000269|PubMed:10869344, ECO:0000269|PubMed:11313946 611..706
RalGDS_RA 612..697 CDD:176351
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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