DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RalGPS and Gm6408

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001230033.1 Gene:Gm6408 / 623198 MGIID:3779591 Length:320 Species:Mus musculus


Alignment Length:173 Identity:32/173 - (18%)
Similarity:58/173 - (33%) Gaps:51/173 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 MACLRQEKTYKEQQMEPPSMQPQASKTLNIKSTRRKNSIGCLNSFSSSP-----DSPGCYYTIAA 135
            :|.:||...|....:.......||.:.|::...:....:.....|:::|     |:.|...|:|.
Mouse   151 LAVVRQFIDYVRHNVPSADEDTQARELLSVLEEQEAIGLNPEEDFATAPEPSEQDASGRQETLAP 215

  Fly   136 SAA----------------------------------PPSKSQSLP-AHASIKQLDAVILSALRV 165
            ..|                                  |||..|::| :..::..:|.....|..|
Mouse   216 RPASETEPQGDKQPREDPELVKGAVLDPSEPKATIELPPSLHQAVPTSDGTLSPVDVTADEATGV 280

  Fly   166 PADVLANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIV 208
            .||..|:        |.|.:.|......::|.:   :.||:.|
Mouse   281 AADEAAD--------VAADVSPARQLFVSYTVQ---LGTPDFV 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 8/40 (20%)
PH_RalGPS1_2 578..692 CDD:270120
Gm6408NP_001230033.1 REM 89..183 CDD:100121 7/31 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.