DRSC/TRiP Functional Genomics Resources

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Protein Alignment RalGPS and Rapgef3

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_038935756.1 Gene:Rapgef3 / 59326 RGDID:621869 Length:1003 Species:Rattus norvegicus


Alignment Length:395 Identity:100/395 - (25%)
Similarity:151/395 - (38%) Gaps:72/395 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PNTNGSAHTMACLRQEKTYKEQQM--------EPPSMQPQASKTLNIKSTRRKNSIGCLNS--FS 121
            |.|......||.|..|..:.:.|:        :...:||.|...        ..|:| ||.  |.
  Rat   657 PVTASVREVMAALAHEDHWTKGQVLVKVNSAGDVVGLQPDARGV--------ATSLG-LNERIFV 712

  Fly   122 SSPDSPGCYYTIAASAAPPSKSQSLPAHASIKQLDAVILSALRVPADVLANQITLLDFPVFAQIQ 186
            ..|..        .....|...|..|...|.:.||.       |.|..||.|:|..|:.:|.:|.
  Rat   713 VDPQE--------VHELTPHPEQLGPTLGSSEMLDL-------VSAKDLAGQLTEHDWNLFNRIH 762

  Fly   187 PDELSSCAWTKKDKH---VNTPNIVAFTKRFNHTSFWTVQEILNAEQPKQRAEIITHFIKVAKKL 248
            ..||  ..:....:|   |.|.|:..|.:|||...:|...|:.....|..||:::..|||:|..|
  Rat   763 QVEL--IHYVLGPQHLRDVTTANLERFMRRFNELQYWVATELCLCPVPGPRAQLLRKFIKLAAHL 825

  Fly   249 HELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDNWANLRSYLESLRLP 313
            .|..||:|.||::..:.:::|.||..||..|..|.|..:..|..:.....|....|..|..|..|
  Rat   826 KEQKNLNSFFAVMFGLSNSAISRLAHTWERLPHKVRKLYSALERLLDPSWNHRVYRLALTKLSPP 890

  Fly   314 CIPYLGLFLTDLIYIDLAHPHKGG---LEPEQRRNKMNNILRVISNYQQSNYKHLQKHEATQKYL 375
            .||::.|.|.|:.:|     |:|.   :|......||..:.|.:....     |.:.|....  |
  Rat   891 VIPFMPLLLKDMTFI-----HEGNHTLVENLINFEKMRMMARAVRMLH-----HCRSHSTAP--L 943

  Fly   376 TSIRYIEELQNIFEEDQYKRSLNLEPASPSGPSSSSCSSKESFNVEVVTPALGCLNLSPAKTIGS 440
            :.:|  ..:.:|.|:.|..|             .|:||.:   ::...:||.....:...|.|.:
  Rat   944 SPLR--SRVSHIHEDSQASR-------------ISTCSEQ---SLSTRSPASTWAYVQQLKVIDN 990

  Fly   441 MRMAS 445
            .|..|
  Rat   991 QRELS 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 53/168 (32%)
PH_RalGPS1_2 578..692 CDD:270120
Rapgef3XP_038935756.1 DEP_Epac 131..254 CDD:239884
CAP_ED 278..387 CDD:237999
RasGEF_N 418..527 CDD:459873
RasGEF 738..1003 CDD:214539 80/297 (27%)
Blue background indicates that the domain is not in the aligned region.

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