DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RalGPS and rasgrf1

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_073786440.1 Gene:rasgrf1 / 568885 ZFINID:ZDB-GENE-090311-28 Length:1264 Species:Danio rerio


Alignment Length:381 Identity:101/381 - (26%)
Similarity:173/381 - (45%) Gaps:46/381 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PTTDYNGYTGQAYAATQFKQSSPPPPPSQQQQQPTRVSKQRSPN--TNGSAHTMACLRQE-KTYK 86
            ||.:  .|...:.|:|.|       |..|:......|.::.:.|  .|...|.::...|: :|..
Zfish   908 PTKE--KYRRMSLASTGF-------PTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFETNT 963

  Fly    87 EQQMEPPSMQPQASKTLNIKSTRRKNSIGCLNSFSSSPDSPG----CYYTIAASAAPPSKSQSLP 147
            |.:|:..|...:......:.:..||.:...:.:.:.  :.||    |...: ...|...||:|..
Zfish   964 ELKMKVISFLEEVMHDPELLTQERKAAANIIRTLTQ--EDPGDNQICLEEV-LQMAEGGKSESFE 1025

  Fly   148 AHASIKQLDAVILSALRVPADVLANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTK 212
            .|::::                :|.|:||||..||..|..:|.....|.|.||:..||.|:..||
Zfish  1026 NHSALE----------------IAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPYIMKTTK 1074

  Fly   213 RFNHTSFWTVQEILNAEQPKQRAEIITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWA 277
            .||..|.....|||..|....|..::..::.||.....|:|.:::..|.|::..:||:||.|||.
Zfish  1075 HFNDISDLIATEILRCEDVNVRVAVMEKWVAVADICRCLHNYNAVLEITSSLNRSSIFRLKKTWL 1139

  Fly   278 CLSKKDRNAFDRLSDIFSDQDNWANLRSYLESLRLPCIPYLGLFLTDLIYIDLAHPH--KGGLEP 340
            .:||:.:...|:|..:.|.:..:.|||..|::...||:||||::||||.:|:...|:  :..|..
Zfish  1140 KVSKQTKTVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVN 1204

  Fly   341 EQRRNKMNNILRVISNYQQSNYK---------HLQKHEATQKYLTSIRYIEELQNI 387
            ..:...:::|:|.|..:||:.||         :|....|..:...|.|:...:|.:
Zfish  1205 FSKMRMISHIIREIRQFQQTAYKIDYQPKAALYLLDRSAVMEEEGSTRHPHNVQTL 1260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 61/167 (37%)
PH_RalGPS1_2 578..692 CDD:270120
rasgrf1XP_073786440.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.