DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5522 and rgl1

DIOPT Version :9

Sequence 1:NP_725613.1 Gene:CG5522 / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_991200.2 Gene:rgl1 / 402933 ZFINID:ZDB-GENE-040426-1816 Length:804 Species:Danio rerio


Alignment Length:528 Identity:130/528 - (24%)
Similarity:192/528 - (36%) Gaps:185/528 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 CLNSFSSSPDSPGCYYTIA------ASAAPPSKSQSLPAHASIKQLDAVILSALRVPA------- 167
            |...|...|..|..:..:.      ..:.|..::|||             |..|||.|       
Zfish   190 CPEDFQEPPSYPSLHRVLGFLQKAMPGSEPMRRAQSL-------------LEQLRVQASLENETE 241

  Fly   168 ------------------------------DVLANQITLLDFPVFAQIQPDELSSCAWT---KKD 199
                                          |::|.|:|.:|..:|.::.|.......|:   |||
Zfish   242 GGFQYINPFCLGEDEEVEIDLQEDFFSFEVDLVAEQLTYMDALLFKKVVPHHCLGSIWSQRDKKD 306

  Fly   200 KHVNTPNIVAFTKRFNHTSFWTVQEILNAEQ--PKQRAEIITHFIKVAKKLHELNNLHSLFAIIS 262
            ...:.|.|.|...:||..:...|..||...|  |..||.||..:|.:|::.....|..||.||:|
Zfish   307 GKQSAPTIRATITQFNAVTACVVSTILRQRQIRPHLRARIIQRWIDIAQECRIRKNFSSLRAIVS 371

  Fly   263 AMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDNWANLRSYL-------------------- 307
            |:||..:|||.:|||.::|.....|:.||||||||:|:...|..|                    
Zfish   372 ALQSNPLYRLKRTWASVAKDSMQMFEELSDIFSDQNNYLTSRELLMREGTSKFASLDSCAKDHQK 436

  Fly   308 ---ESLRLP--------CIPYLGLFLTDLIYIDLAHPH--KGGL-EPEQRRNKMNNILRVISNYQ 358
               :.|:|.        .|||||.|||||..:|.|.|.  :||| ..|:||.:...|.::     
Zfish   437 RSQKRLQLQKDMGAMQGTIPYLGTFLTDLTMLDTALPDQVEGGLINFEKRRREFEVIAQI----- 496

  Fly   359 QSNYKHLQKHEATQKYLTS-----IRYIEELQNIFEEDQYKRSLNLE------PASP-------- 404
                |.||  .|...|..:     :|:.:......||:.|..|..:|      |.||        
Zfish   497 ----KLLQ--SACNSYCLTPDPAFLRWFKSQPQYSEEESYVLSCEVEGLGDNSPTSPKPRKSMVK 555

  Fly   405 -----------------------SGPSSSSCSSKESFNV----------EVVTP----------- 425
                                   |.|:.||..|.:|.:|          :.:||           
Zfish   556 RLSLLFLGNDSTNTSSPVRESPRSPPTGSSGESMDSVSVSSSDSSPSESDGMTPTHSIDAHLKKL 620

  Fly   426 -------ALGCLNLSPAKTIGSMRMASGTKFVPG----HRKCRSLGTKFRSSS--LPRNFAEKCQ 477
                   :|..::.|.:....|:.:||.|  :||    ||:..||......:|  .|..:..:.|
Zfish   621 SESSSCNSLHSMDTSSSTASASISLASPT--LPGPPCNHRRSISLTPLMSPTSPGFPPAYNTQAQ 683

  Fly   478 -CCIVMIA 484
             .||:.::
Zfish   684 DACIIRVS 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5522NP_725613.1 RasGEF 163..400 CDD:214539 91/317 (29%)
PH_RalGPS1_2 578..692 CDD:270120
PH 578..685 CDD:278594
rgl1NP_991200.2 REM 109..232 CDD:100121 10/54 (19%)
RasGEF 266..535 CDD:238087 87/279 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 564..611 9/46 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 640..676 11/37 (30%)
RalGDS_RA 684..769 CDD:176351 2/8 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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