DRSC/TRiP Functional Genomics Resources

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Protein Alignment RalGPS and Rapgef5

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001382072.1 Gene:Rapgef5 / 362799 RGDID:1561668 Length:880 Species:Rattus norvegicus


Alignment Length:241 Identity:62/241 - (25%)
Similarity:108/241 - (44%) Gaps:19/241 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 LANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTKRFNHTSFWTVQEILNAEQPKQR 234
            ||.::...|:.:|..|...||....::::....:|.|:....:|.|....|...|||...|..:|
  Rat   648 LALELMSFDWSLFNSIHEQELIYFTFSRQGSGEHTVNLSLLLQRCNEVQLWVATEILLCSQLGKR 712

  Fly   235 AEIITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDN 299
            .:::..|||:|.......||:|.|||:..:.:||:.||::||..:..|.:..|..|..:.....|
  Rat   713 VQLVKKFIKIAAHCKAQQNLNSFFAIVMGLNTASVSRLSQTWEKIPGKFKKLFSELESLTDPSLN 777

  Fly   300 WANLRSYLESLRLPCIPYLGLFLTDLIYIDLAHPHKGG---LEPEQRRNKMNNI------LRVIS 355
            ....|...:.::.|.||::.|.|.|:.:|     |:|.   |:......|::.|      ||...
  Rat   778 HKAYRDAFKKMKPPKIPFMPLLLKDVTFI-----HEGNKTFLDNLVNFEKLHMIADTVRTLRHCR 837

  Fly   356 NYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYKRSLNLEP 401
            ..|..:....::.:..:.|:..:..|:..|.:||     .|..|||
  Rat   838 TNQFGSDMSPKEQQELKSYVNHLYVIDSQQALFE-----LSHRLEP 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 45/164 (27%)
PH_RalGPS1_2 578..692 CDD:270120
Rapgef5NP_001382072.1 DEP_Epac 98..221 CDD:239884
RasGEFN 368..499 CDD:214571
RasGEF 640..879 CDD:214539 62/241 (26%)
Blue background indicates that the domain is not in the aligned region.

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