DRSC/TRiP Functional Genomics Resources

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Protein Alignment RalGPS and Rasgef1c

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001101743.1 Gene:Rasgef1c / 360519 RGDID:1311549 Length:466 Species:Rattus norvegicus


Alignment Length:486 Identity:108/486 - (22%)
Similarity:164/486 - (33%) Gaps:164/486 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SPPPPPSQQQQQPTRVSKQRSPNTNGSAHTM-------ACLRQEKTY------------------ 85
            ||||..|.:.:|..:.....:| ::.|..|:       |....||.|                  
  Rat    17 SPPPIDSTEGEQAGQPLLDGAP-SSASLETLIQHLVPTADYYPEKAYIFTFLLSSRLFIEPRELL 80

  Fly    86 --------KEQQMEPPSMQPQ-----ASKTLNI---------KSTRRKNSIG-----------C- 116
                    ::||::.|.:...     .:|.|.:         :....:::||           | 
  Rat    81 ARVCHLCIEQQQLDKPVLDKARVRKFGAKLLQLLAEWTETFPRDFEEESTIGHLTDVVGRISPCD 145

  Fly   117 -----------------LNSFSSSP------DSPGCYYTIAASAAPPSKSQSLPAHASIKQLDAV 158
                             |.|....|      |.|..|.|     .||         |||.:    
  Rat   146 ETYGNRMHQLLQTLHQKLASLGQGPEGLVGADKPISYRT-----KPP---------ASIHR---- 192

  Fly   159 ILSALRVPAD--VLANQITLLDFPVFAQIQPDEL-------SSCAWTKKDKHVNTPNIVAFTKRF 214
              ..|.|.:|  .||.|:|.::......|.|:|.       ...|.||...:..|.|:.|:.|.|
  Rat   193 --ELLGVCSDPYTLAQQLTHVELERLRHIGPEEFVQAFVNKDPLAGTKPRFNDKTNNVEAYVKWF 255

  Fly   215 NHTSFWTVQEILNAEQPKQRAEIITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACL 279
            |...:....||....:.||||::|..||.||::...:.|.:||.||||.|..:.:.||.||||  
  Rat   256 NRLCYLVATEICMPAKKKQRAQVIEFFIDVARECFNIGNFNSLMAIISGMNMSPVSRLKKTWA-- 318

  Fly   280 SKKDRNAFDRLSDIFSDQDNWANLRSYL-----------ESLRLPCIPYLGLFLTDLIYIDLAHP 333
             |.....|..|........|:.|.|:.|           .|.....||:..|.:.|:.:::    
  Rat   319 -KVKTAKFFILEHQMDPTGNFCNYRTALRGAAHRSLTAHSSREKIVIPFFSLLIKDIYFLN---- 378

  Fly   334 HKGGLEPEQRRNKMNNILRVISNYQQSNY-KHLQKHEATQKYLT------------SIRYIEELQ 385
                   |...|::.|        ...|: |.|:..:...:::|            ||.:.....
  Rat   379 -------EGCANRLPN--------GHVNFEKFLELAKQVGEFITWKQVECPFEQDPSITHYLYTA 428

  Fly   386 NIFEEDQYKRSLNLEPASPSGPSSSSCSSKE 416
            .||.||      .|..||....|..:.:.||
  Rat   429 PIFSED------GLYLASYESESPENQTEKE 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 53/183 (29%)
PH_RalGPS1_2 578..692 CDD:270120
Rasgef1cNP_001101743.1 REM 42..163 CDD:100121 14/120 (12%)
RasGEF 204..395 CDD:459872 57/212 (27%)
Blue background indicates that the domain is not in the aligned region.

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