DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5522 and Rapgef5

DIOPT Version :9

Sequence 1:NP_725613.1 Gene:CG5522 / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001360918.1 Gene:Rapgef5 / 217944 MGIID:2444365 Length:879 Species:Mus musculus


Alignment Length:241 Identity:63/241 - (26%)
Similarity:108/241 - (44%) Gaps:19/241 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 LANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTKRFNHTSFWTVQEILNAEQPKQR 234
            ||.::...|:.:|..|...||....::::....||.|:....:|.|....|...|||...|..:|
Mouse   647 LALELMSFDWSLFNSIHEQELIYFTFSRQGNGENTVNLSLLLQRCNEVQLWVATEILLCSQLGKR 711

  Fly   235 AEIITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDN 299
            .:::..|||:|.......||:|.|||:..:.:||:.||::||..:..|.:..|..|..:.....|
Mouse   712 VQLVKKFIKIAAHCKAQQNLNSFFAIVMGLNTASVSRLSQTWEKIPGKFKKLFSELESLTDPSLN 776

  Fly   300 WANLRSYLESLRLPCIPYLGLFLTDLIYIDLAHPHKGG---LEPEQRRNKMNNI------LRVIS 355
            ....|...:.::.|.||::.|.|.|:.:|     |:|.   |:......|::.|      ||...
Mouse   777 HKAYRDAFKKMKPPKIPFMPLLLKDVTFI-----HEGNKTFLDNLVNFEKLHMIADTVRTLRHCR 836

  Fly   356 NYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYKRSLNLEP 401
            ..|..:....::.:..:.|:..:..|:..|.:||     .|..|||
Mouse   837 TNQFGSDVSPKEQQELKSYVNHLYVIDSQQALFE-----LSHRLEP 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5522NP_725613.1 RasGEF 163..400 CDD:214539 60/238 (25%)
PH_RalGPS1_2 578..692 CDD:270120
PH 578..685 CDD:278594
Rapgef5NP_001360918.1 DEP_Epac 98..221 CDD:239884
RasGEFN 367..498 CDD:214571
RasGEF 639..878 CDD:214539 63/241 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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