DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5522 and Sos2

DIOPT Version :9

Sequence 1:NP_725613.1 Gene:CG5522 / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_006515698.1 Gene:Sos2 / 20663 MGIID:98355 Length:1333 Species:Mus musculus


Alignment Length:497 Identity:114/497 - (22%)
Similarity:196/497 - (39%) Gaps:95/497 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 IKSTRRK------NSIGCLNSFSSSPDSPGCYYTIAASAAPPSKSQSLPAHASIKQLDAVILSAL 163
            |.|.|.|      .||..:........:.|..:.|...::||.....:......:..|.:.|..:
Mouse   717 ISSVRGKAMKKWVESIAKIIKRKKQAQANGISHNITFESSPPPVEWHISRTGQFETFDLMTLHPI 781

  Fly   164 RVPADVLANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTKRFNHTSFWTVQEILNA 228
            .:     |.|:|||:..::.::||.||....|||:||.:|:||::...:...:.:.|..:.|:.|
Mouse   782 EI-----ARQLTLLESDLYRKVQPSELVGSVWTKEDKEINSPNLLKMIRHTTNLTLWFEKCIVEA 841

  Fly   229 EQPKQRAEIITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDI 293
            |..::|..:::..:::.:...:|||.:.:..|:||:.|.|:|||..|:..|.::.|...|...::
Mouse   842 ENFEERVAVLSRIVEILQVFQDLNNFNGVLEIVSAVNSVSVYRLDHTFEALQERKRRILDDAVEL 906

  Fly   294 FSDQDNWANLRSYLESLRLPCIPYLGLFLTDLIYIDLAH----PHKG-GLEPEQRRNKMNNILRV 353
              .||::......|:|:..||:|:.|::||:::..:..:    ..|| .|....:|.|:..|...
Mouse   907 --SQDHFKKYLVKLKSINPPCVPFFGIYLTNILKTEEGNSDFLKRKGKDLINFSKRRKVAEITGE 969

  Fly   354 ISNYQQSNYKHLQKHEATQKYLTSIRYIEEL-------QNIFEEDQYKRSLNLEPAS----PSGP 407
            |..||  |..:..:.|...:     |:.|.|       :..|.:..:.:||.:||.:    |..|
Mouse   970 IQQYQ--NQPYCLRTEPEMR-----RFFENLNPMGILSEKEFTDYLFNKSLEIEPRNCKQPPRFP 1027

  Fly   408 SSSSCSSKESFNVEVVTPALGCLNLSPAKTIGSMRMASGTKFVPGHRK-----------CRSLGT 461
            ..|:.|.|                 ||.....:.|..|.:..:.||..           .|...|
Mouse  1028 RKSTFSLK-----------------SPGIRPNAGRHGSTSGTLRGHPTPLEREPYKISFSRIAET 1075

  Fly   462 KFRSS-SLPRNFAEKCQCCIVMIAPGIGTIS-------------NKRCRCRRIFGKI-----ATH 507
            :..|: |.|.:          ...|....:|             |..|....||..:     .|.
Mouse  1076 ELESTVSAPTS----------PNTPSTPPVSASSDHSVFLDVDLNSSCGSNTIFAPVLLPHSKTF 1130

  Fly   508 NHSDGHPHHLHLE-LDPSQVQPRHHLLDDSVLEHSDALSQAD 548
            ..|.|..|.|..| |.|..:.||.. .|...|....|:...|
Mouse  1131 FSSCGSLHKLSEEPLIPPPLPPRKK-FDHDALNSKGAVKSDD 1171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5522NP_725613.1 RasGEF 163..400 CDD:214539 64/248 (26%)
PH_RalGPS1_2 578..692 CDD:270120
PH 578..685 CDD:278594
Sos2XP_006515698.1 Histone 70..169 CDD:333859
RhoGEF 200..387 CDD:238091
PH_SOS 438..544 CDD:269963
RasGEFN 596..740 CDD:214571 6/22 (27%)
RasGEF 775..1019 CDD:214539 67/257 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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