DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5522 and Rgl2

DIOPT Version :9

Sequence 1:NP_725613.1 Gene:CG5522 / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_033085.2 Gene:Rgl2 / 19732 MGIID:107483 Length:778 Species:Mus musculus


Alignment Length:555 Identity:124/555 - (22%)
Similarity:204/555 - (36%) Gaps:156/555 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 SPDSPGCYYTIAASAAPPSKSQSLPAHASIKQLDAVILSALRVPADVLANQITLLDFPVFAQIQP 187
            :||.|              |..:||..:.....|.::..     ||.||.|:||||..:|..:.|
Mouse   219 APDLP--------------KPLALPGDSPADPTDVLVFL-----ADHLAEQLTLLDAELFLNLIP 264

  Fly   188 DELSSCAWTKKDK----HVNTPNIVAFTKRFNHTSFWTVQEILNAE--------------QPKQR 234
            .:.....|..:|:    |: .|::.|...:||..:...|..:|.|.              :|.||
Mouse   265 SQCLGGLWGHRDRPGHSHL-CPSVRATVTQFNKVAGAVVSSVLGATSIGEGPREVTVRPLRPPQR 328

  Fly   235 AEIITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDN 299
            |.::..:|:||::...|.|..|::|::||:||:.|:||...|...::.....|..|..|||::||
Mouse   329 ARLLEKWIRVAEECRLLRNFSSVYAVVSALQSSPIHRLRAAWGETTRDSLRVFSSLCQIFSEEDN 393

  Fly   300 WANLRSYL------------ESLRLP--------CIPYLGLFLTDLIYIDLAHP---HKGGLEPE 341
            ::..|..|            .|.:.|        .:||||.||.||:.:|.|..   ..|.:..:
Mouse   394 YSQSRELLMQEVKPQPPVEPHSKKAPRSGFRGGGVVPYLGTFLKDLVMLDAASKDELENGYINFD 458

  Fly   342 QRRNKMNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYKRSLNLEPASPSG 406
            :||.:...:..::...::.....|:.:...|::|      :.||.:.|...::.|..:||...| 
Mouse   459 KRRKEFAILSELLRLQKECRGYDLRPNSDIQQWL------QGLQPLTEAQSHRVSCEVEPPGTS- 516

  Fly   407 PSSSSCSSKESFNVEVVTPALGCLNLSPAKTIGSMRMASGTKFVPG-----------HRK---CR 457
            .|.::.:.:.:..:...|..||.:. .|...:...|.:.|...|||           |.|   ..
Mouse   517 DSPAARTPRPTLVITQWTEVLGSVG-GPTPLVSWDRPSVGGDEVPGTPAPLLTRLAQHMKWPSVS 580

  Fly   458 SLGTKFRSSSLPRNFAEKCQCCIVMIAPGIGTISNKRCRCRRIFGKIATHNHSDGHPHHLHLELD 522
            ||.:...||                  |.:                     ||...|.|    |.
Mouse   581 SLDSALESS------------------PSL---------------------HSPADPGH----LS 602

  Fly   523 PSQVQPRHHLLDDSVLEHSDALSQADLTSLESAEGIM----C--DFTG---SDCDLMSPEAAAAM 578
            |....||      ....|..:.|.....|..:.||..    |  ..:|   |||.::..:.....
Mouse   603 PPASSPR------PSRGHRRSASCGSPLSGNTGEGTSRSAGCGGGVSGPGSSDCRIIRVQMELGE 661

  Fly   579 HGCVRR---------------KTVQKEGRKPAVAS 598
            .|.|.:               :.::|..|..||||
Mouse   662 DGSVYKSILVTSQDKAPSVISRVLKKNNRDSAVAS 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5522NP_725613.1 RasGEF 163..400 CDD:214539 71/277 (26%)
PH_RalGPS1_2 578..692 CDD:270120 8/36 (22%)
PH 578..685 CDD:278594 8/36 (22%)
Rgl2NP_033085.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..59
RasGEFN 90..212 CDD:214571
RasGEF 239..513 CDD:214539 72/285 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..524 5/21 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 541..564 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 581..647 20/114 (18%)
RalGDS_RA 649..734 CDD:176351 10/48 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 735..769
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.