DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5522 and Rasgrf1

DIOPT Version :9

Sequence 1:NP_725613.1 Gene:CG5522 / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001164002.1 Gene:Rasgrf1 / 192213 RGDID:620395 Length:1244 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5522NP_725613.1 RasGEF 163..400 CDD:214539
PH_RalGPS1_2 578..692 CDD:270120
PH 578..685 CDD:278594
Rasgrf1NP_001164002.1 PH-like 19..154 CDD:302622
PH 24..129 CDD:278594
RhoGEF 244..425 CDD:214619
PH-like 431..580 CDD:302622
PH 476..581 CDD:278594
RasGEF_N 632..>680 CDD:279012
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 707..730
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 800..840
REM <909..978 CDD:295342
RasGEF 1005..1241 CDD:214539
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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