DRSC/TRiP Functional Genomics Resources

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Protein Alignment RalGPS and sos-1

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_504235.2 Gene:sos-1 / 178846 WormBaseID:WBGene00004947 Length:1493 Species:Caenorhabditis elegans


Alignment Length:722 Identity:151/722 - (20%)
Similarity:245/722 - (33%) Gaps:190/722 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PPSQQQQQPTRVSKQRSPNTNG------SAHTMACLRQEKTYKEQQMEPPSMQPQASKTLNIKST 108
            ||...||          ||.||      ..|..:..    .:.:.|..||..|            
 Worm   827 PPGIMQQ----------PNENGDKGAADEGHVNSAF----VFGDDQQHPPQHQ------------ 865

  Fly   109 RRKNSIGCLNSFSSSPDSPGCYYTIAASAAPPSKSQSLPAHASIKQLDAVILSALRVPADVLANQ 173
                                 .||   :.:|...:|.|...|....:|...|..|. |.:: ..|
 Worm   866 ---------------------VYT---NESPKETNQVLWHTAQKGDVDHYDLLTLH-PIEI-GRQ 904

  Fly   174 ITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTKRFNHTSFWTVQEILNAEQPKQRAEII 238
            :|||...::..|||.||...||||.:|...:|.::..|......::|..:.|:..|..::|..:.
 Worm   905 LTLLHSDLYRAIQPIELVEAAWTKAEKWRKSPQLLRLTDHSTLLTYWVSRSIVETESLEERMAMF 969

  Fly   239 THFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDNWANL 303
            ...::|.....||:|...|.|..||:.|:.|:||...|..|..:.:..|||.:.:.  :..|..:
 Worm   970 NRVLEVMSVFEELHNFTGLVAFYSALNSSCIFRLKWCWDGLDNEKKKCFDRFNTLC--ERRWQEM 1032

  Fly   304 RSYLESLRLPCIPYLGLFLTDLIYIDLAH--------PH-KGGLEPEQRRN-------------- 345
            :..|.|:..||||:.|.:|:::.:::..:        || ..|.:.:|:.:              
 Worm  1033 QKRLSSINPPCIPFFGHYLSNIYFLEQGNSTFVNKSPPHGAAGAQKQQKDDLKASDPENSNKQFK 1097

  Fly   346 ---------KMNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQN--IFEEDQYKRSLNL 399
                     |::|::|.|..:|...|. |......:::..||....:.::  ..||..|.:||.:
 Worm  1098 QLVSFLKLRKISNVIREIQIFQDQRYS-LTLEPTIRQFFESINPKNDFKSNEDLEEYLYNKSLEI 1161

  Fly   400 EPASPSGPSSSSCSSKESFNVEVV-TPALGCLNLSPAKTIGSMRMASGTKFVPGHRKCRSLGTKF 463
            :   |.|..:.:...|...|...: :|     .:.|.|       |:|..:...|    .:|...
 Worm  1162 Q---PKGLDTPTAELKPKHNASTLRSP-----GVKPPK-------AAGNHYSANH----PIGLHL 1207

  Fly   464 RSS---SLPRNFAEKCQCCIVMIAPGIGTISNKRCRCRRIFGKIATHNHSDG------------- 512
            .|.   |.|.  |...|...|...| :.....||.         .:||..|.             
 Worm  1208 HSQNSHSAPH--AMSSQSSTVPNTP-LSAHETKRS---------LSHNQDDAPLQQFVDIRFERK 1260

  Fly   513 --HPHHLHLELDPSQVQPRHHLLDDSVLEHSDALSQADLTSLESAEGIMCDFTGSD--CDLMSPE 573
              ||....|:  |..:.||....:.|........:||.:.....:.|:|...|...  ....:|.
 Worm  1261 GTHPKIPVLQ--PPPLLPRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTTPS 1323

  Fly   574 AAAA----MHGCVRRKTVQKE---GRKPAVASWQRYWLQIWANSLVY----FPPKSFKGSERNDF 627
            :|..    :|  .||.|.|..   .:.|...|........:...:||    .||...:.|..:|.
 Worm  1324 SAGGPPPKLH--PRRMTQQPMSPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDV 1386

  Fly   628 KREPCKVCPLDGWYAHVSDNTKHKNTFELCHRTLGTVY-RFRTDSPQMTHLWSNAICKLATMRVP 691
            ...|       ......|..||..      ...|..:: |..:.||              |:|:.
 Worm  1387 SSSP-------STSGSTSSATKEN------QEQLRVIFDREESHSP--------------TVRLS 1424

  Fly   692 KPLPTNL 698
            .|||..|
 Worm  1425 VPLPPAL 1431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 48/174 (28%)
PH_RalGPS1_2 578..692 CDD:270120 23/121 (19%)
sos-1NP_504235.2 HFD_SF <153..204 CDD:480273
RhoGEF 248..447 CDD:470622
PH-like 493..604 CDD:473070
RasGEF_N 659..794 CDD:459873
RasGEF 900..1067 CDD:459872 46/169 (27%)
PHA03247 <1277..1379 CDD:223021 20/103 (19%)
Blue background indicates that the domain is not in the aligned region.

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