DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RalGPS and RAPGEF4

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_008954.2 Gene:RAPGEF4 / 11069 HGNCID:16626 Length:1011 Species:Homo sapiens


Alignment Length:250 Identity:62/250 - (24%)
Similarity:108/250 - (43%) Gaps:29/250 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 LANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTKRFNHTSFWTVQEILNAEQPKQR 234
            ||.|:|:.|:.:|..:...||....:.:.:....|.|:..|.:|||...||.|.||....|..:|
Human   776 LAYQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQFWVVTEICLCSQLSKR 840

  Fly   235 AEIITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDN 299
            .:::..|||:|....|..||:|.|||:..:.:.::.||..||..|..|.:..:.....:.....|
Human   841 VQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVSRLALTWEKLPSKFKKFYAEFESLMDPSRN 905

  Fly   300 WANLRSYLESLRLPCIPYLGLFLTDLIYIDLAHPHKG------GLEPEQRRNKMNNILRVISNYQ 358
            ....|..:..|..|.||::.|.:.|:.:     .|:|      .|...::...:.|..|.:..|:
Human   906 HRAYRLTVAKLEPPLIPFMPLLIKDMTF-----THEGNKTFIDNLVNFEKMRMIANTARTVRYYR 965

  Fly   359 ---------QSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYKRSLNLEPASP 404
                     |:|    :.|:..:.|:..:..|:..:.:.:     .|..|||..|
Human   966 SQPFNPDAAQAN----KNHQDVRSYVRQLNVIDNQRTLSQ-----MSHRLEPRRP 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 46/164 (28%)
PH_RalGPS1_2 578..692 CDD:270120
RAPGEF4NP_008954.2 CAP_ED 43..158 CDD:237999
DEP_Epac 206..334 CDD:239884
CAP_ED 356..467 CDD:237999
RasGEF_N 499..605 CDD:459873
RasGEF 768..1009 CDD:214539 60/246 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.