DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RalGPS and Ralgdsl7

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_017453122.1 Gene:Ralgdsl7 / 102552619 RGDID:7567332 Length:206 Species:Rattus norvegicus


Alignment Length:156 Identity:31/156 - (19%)
Similarity:61/156 - (39%) Gaps:48/156 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 TRVSKQRSPNTNG-----SAHTMACLRQEKTYKEQQMEPPSMQPQASKTLNIKSTRRKNSIGCLN 118
            ||.|..:..|..|     ....::||::             :.|.:.|..|:    .|.|.|..:
  Rat     9 TRGSGLKKDNRKGHDGVWRGRVLSCLQR-------------LWPFSKKGKNL----TKASQGNTD 56

  Fly   119 SFSSSPDSPGCYYTIAASAAPPSKSQSLPAHASIKQLDAVI--LSALRVPADVLANQITLLD--F 179
            ..:|:          ......|.:..|:.|.::::.::.::  |||.|    .:|..:.:||  |
  Rat    57 QHTSA----------QKDQMEPQRESSIRAQSAVEHMNILVPPLSAYR----RIATPLQILDLLF 107

  Fly   180 PVFAQIQPDELSSCAWTKKDKHV-NT 204
            ...:.:.|       ::|:|:.| ||
  Rat   108 VRHSYLSP-------YSKEDEQVKNT 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 10/39 (26%)
PH_RalGPS1_2 578..692 CDD:270120
Ralgdsl7XP_017453122.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.