DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RalGPS and rgl3

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_012808636.1 Gene:rgl3 / 100485337 XenbaseID:XB-GENE-493046 Length:712 Species:Xenopus tropicalis


Alignment Length:567 Identity:136/567 - (23%)
Similarity:217/567 - (38%) Gaps:139/567 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 RQEKTYKEQQMEPPSMQPQASKTLNIKSTRRKNSIGCL--NSFSSSP----DSPGCY-----YTI 133
            |.|:|.:|:.:.|.|..|.......:        :.||  :.....|    |:|.|.     |..
 Frog   140 RLERTSEEEHVTPGSPVPDTPSVQRV--------VRCLLQSWLEKHPQDFRDAPDCLQLISNYLS 196

  Fly   134 AASAAPPSK----SQSL---------PAHASIK--------QLDAVILSALRVPADVLANQITLL 177
            .....|||.    .|||         |..:.:.        :.....:..|..|...:|.|:||:
 Frog   197 CDKREPPSPLLRLLQSLQEEMEESPTPMGSKVNLQPVEGDTETPGPTIDLLSFPPQDVAEQLTLI 261

  Fly   178 DFPVFAQIQPDELSSCAWTKKDKHVN---TPNIVAFTKRFNHTSFWTVQEILNAEQ--PKQRAEI 237
            |..:|.::|........|:::||..|   .|::.|...:||..:...:..:|:..|  |:|||::
 Frog   262 DVDLFQKLQSCHCLGSIWSQRDKKENRNVAPSVRATVAQFNAVTACVIASVLSDVQLKPQQRAKV 326

  Fly   238 ITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDNWAN 302
            :..:|.:|:....|.|..||.||:||:||..:|||.:|||.:|:.:.|.|.:|||||||::|...
 Frog   327 LEKWICIAQHCRFLRNFSSLRAILSALQSNPLYRLKRTWAAVSRDNLNIFHKLSDIFSDENNHGM 391

  Fly   303 LRSYLESLRLP-----------------------------CIPYLGLFLTDLIYIDLAHPH--KG 336
            .|..|....:|                             .:||||.||||||.:|.|.|.  :|
 Frog   392 SREILTKEEIPLRRTNSARNEPRPLQRSASQVRSTRVLQGTVPYLGTFLTDLIMLDTALPDCTEG 456

  Fly   337 GLEPEQRRNKMNNILRVISNYQQS--NYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYKRSLNL 399
            ||...::|.|...:|..|...|.:  :|....|.|..:.:.:.       :.:.|:..|:.|..:
 Frog   457 GLINFEKRRKEYEVLAKIQKLQLTCRHYVLTAKPEILRAFYSQ-------RQLTEDQSYRISRTI 514

  Fly   400 EPASPSGPSSSSCSSKES-------FNVEVVTPALGCLNLSPAKTIGSMRMASG--TKFVPGHRK 455
            ||.:.|.|:|.....|.:       ...||..|.|....:||:.:..|.....|  :...|    
 Frog   515 EPPADSCPNSPRIRRKLTKRFSSLLLGSEVFGPKLNGDRVSPSGSCNSCETDDGLISALCP---- 575

  Fly   456 CRSLGTKFRSSSLPRNFAEKCQCCIVMIAPGIGTISNKRCRCRRIFGKIATHNHSDGHPHHLHLE 520
                    ..||..:|..|          ||...               .|..|.|.........
 Frog   576 --------NESSTQKNMQE----------PGTPP---------------TTPRHDDQFRFAPRSP 607

  Fly   521 LDPSQVQPRHH--LLDDSVLE------HSDALSQADLTSLESAEGIM 559
            :.||..||.::  :.|..::.      |.:......|||.:.:..::
 Frog   608 VSPSSTQPLYNQQIADLCIIRVSMENTHGNMYKSILLTSQDKSRAVI 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 66/201 (33%)
PH_RalGPS1_2 578..692 CDD:270120
rgl3XP_012808636.1 RasGEF_N 91..191 CDD:459873 13/58 (22%)
RasGEF 246..517 CDD:214539 83/277 (30%)
RA_RalGDS_like 623..708 CDD:340449 5/32 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.