DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5522 and Ralgps1

DIOPT Version :9

Sequence 1:NP_725613.1 Gene:CG5522 / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_006234077.1 Gene:Ralgps1 / 100361774 RGDID:2319500 Length:609 Species:Rattus norvegicus


Alignment Length:628 Identity:241/628 - (38%)
Similarity:331/628 - (52%) Gaps:133/628 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 GCYYTIAASAAPP---SKSQSLPA----HASIKQLDAVILSALRVPADVLANQITLLDFPVFAQI 185
            |...::..::|.|   |.|.||..    ||| |..|||:...|:|..:..|:||||:|.|||..|
  Rat     6 GLMASVLVTSATPQGSSSSDSLEGQSCDHAS-KSYDAVVFDVLKVTPEEFASQITLMDIPVFKAI 69

  Fly   186 QPDELSSCAWTKKDKHVNTPNIVAFTKRFNHTSFWTVQEILNAEQPKQRAEIITHFIKVAKKLHE 250
            ||:||:||.|:||:||...||:||||:|||..|||.|:|||.|:..|.||||::||:|:||||.|
  Rat    70 QPEELASCGWSKKEKHSLAPNVVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLE 134

  Fly   251 LNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDNWANLRSYLESLRL-PC 314
            |||||||.:::||:|||.|:|||||||.|::||:..|::|..:.|.:||:...|.|:.||:: |.
  Rat   135 LNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLMSKEDNYKRTRDYIRSLKMVPS 199

  Fly   315 IPYLGLFLTDLIYIDLAHPHKGG-LEPEQRRNKMNNILRVISNYQQS-NYKHLQKHEATQKYLTS 377
            |||||::|.||||||.|:|..|. :|.|||.|:||||||:|::.|.| :|.||......||||.|
  Rat   200 IPYLGIYLLDLIYIDSAYPASGSIMENEQRSNQMNNILRIIADLQVSCSYDHLTTLPHVQKYLKS 264

  Fly   378 IRYIEELQNIFEEDQYKRSLNLEPASPS-----------GPSSSSCSSKESFNVEVVTPALGCLN 431
            :|||||||...|:|.||.||.:||.|.|           |||:.|.|::  |......|      
  Rat   265 VRYIEELQKFVEDDNYKLSLRIEPGSSSPRLVSSKEDLAGPSAGSSSAR--FRRRPTCP------ 321

  Fly   432 LSPAKTIGSMRMASGTKFVPGHRKCRSLGTKFRSSSLPRNFAEKCQCCIVMIAPGIGTISNKRCR 496
              .|...||:    .|..||.|||..|||                              :|..|:
  Rat   322 --DASVAGSL----PTPPVPRHRKSHSLG------------------------------NNLMCQ 350

  Fly   497 CRRIFGKIATHNHSDGHPHHLHLELDPSQVQPRHHLLDDSVLE---------HSDALSQADLTSL 552
            ...:..|.||.               ||  :...|||||||||         |:.:.:..:..||
  Rat   351 LSVVDSKSATF---------------PS--EKARHLLDDSVLESRSPRRGLTHTSSTAITNGLSL 398

  Fly   553 ESAE----------GI-------------------------MCDFTGSD---CDLMSPEAAAAMH 579
            .|:|          |:                         .|.::.:.   |.:.|......|.
  Rat   399 GSSESSEFSEEMSAGLESRGRLYATLGPNWRVPVRNSPRTRSCVYSPTSPCTCTVGSSATVPTME 463

  Fly   580 GCVRRKTVQKEGRKPAVASWQRYWLQIWANSLVYFPPKSFKGSERNDFKREPCKVCPLDGWYAHV 644
            |.:||||:.|||||||:.||.|||:.:..::|:|:..||.:|::|..:|..|.|...:.||...:
  Rat   464 GPLRRKTLLKEGRKPALPSWTRYWVVLSGSTLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQL 528

  Fly   645 SDNTKHKNTFELCHRTLGTVYRFRTDSPQMTHLWSNAI---CK 684
            .|:.:|.:.|:|.:...|.||:|:|.|.....||...:   ||
  Rat   529 PDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5522NP_725613.1 RasGEF 163..400 CDD:214539 136/239 (57%)
PH_RalGPS1_2 578..692 CDD:270120 43/110 (39%)
PH 578..685 CDD:278594 43/110 (39%)
Ralgps1XP_006234077.1 RasGEF 46..288 CDD:214539 136/241 (56%)
PH_RalGPS1_2 461..576 CDD:270120 43/111 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 220 1.000 Domainoid score I2538
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H65163
Inparanoid 1 1.050 378 1.000 Inparanoid score I2007
OMA 1 1.010 - - QHG49702
OrthoDB 1 1.010 - - D184404at33208
OrthoFinder 1 1.000 - - FOG0003356
OrthoInspector 1 1.000 - - otm45986
orthoMCL 1 0.900 - - OOG6_104897
Panther 1 1.100 - - O PTHR23113
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2715
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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