DRSC/TRiP Functional Genomics Resources

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Protein Alignment RalGPS and rapgefl1

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_012826984.1 Gene:rapgefl1 / 100145761 XenbaseID:XB-GENE-994178 Length:637 Species:Xenopus tropicalis


Alignment Length:312 Identity:72/312 - (23%)
Similarity:129/312 - (41%) Gaps:52/312 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 PDSPGCYYTIAA--------------SAAP-PSKSQSLPAHASIKQLDAVILSALRVPADVLANQ 173
            ||. ||.:|...              |..| |.:.|..|..:.|.          |:.|:.||||
 Frog   341 PDD-GCIFTTLGINSHLFACNREELRSLVPLPEEVQLPPEDSHIH----------RIEAEDLANQ 394

  Fly   174 ITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTKRFNHTSFWTVQEILNAEQPKQRAEII 238
            ::...:.:|:.:...|.....:..:.....|.|:....:|.:....|...:.|..|.|.:|.:::
 Frog   395 LSAFHWELFSCVHELEFIDYVFHVERGRRETANLELLLQRCSEVQHWVSTQTLLCEGPARRTQLL 459

  Fly   239 THFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTW----------AC--LSKKDRNAFDRLS 291
            ..|||.|....:..:|.|.|||:..:.:.::.||..||          .|  |..|.:|.|.:..
 Frog   460 KKFIKTAAICKQNQDLLSFFAIVMGLDNGAVSRLRVTWEGTIDRARNARCQKLPGKCKNLFRKFE 524

  Fly   292 DIFSDQDNWANLRSYLESLRLPCIPYLGLFLTDLIYIDLAHPHKG------GLEPEQRRNKMNNI 350
            ::.....|..:.|..:..:|.|.||::.|.|.||.::     |:|      ||...::.:.:...
 Frog   525 NLTDPCRNHKSYREMVSRMRPPVIPFIPLILKDLTFL-----HEGSKTFIDGLVNVEKMHAIAEK 584

  Fly   351 LRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEED-QYKRSLNLEP 401
            :|.:..| :||...|.. :.:..:|.:..|:.:.|.|..:: .::.|..|||
 Frog   585 VRTVRKY-RSNQLRLDT-DVSPTHLQNKAYVRQFQVIDNQNLLFELSCKLEP 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 42/177 (24%)
PH_RalGPS1_2 578..692 CDD:270120
rapgefl1XP_012826984.1 REM 108..209 CDD:470601
RasGEF 383..634 CDD:214539 60/267 (22%)
Blue background indicates that the domain is not in the aligned region.

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