DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5522 and ralgps1

DIOPT Version :9

Sequence 1:NP_725613.1 Gene:CG5522 / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001093616.1 Gene:ralgps1 / 100101642 ZFINID:ZDB-GENE-070720-16 Length:581 Species:Danio rerio


Alignment Length:630 Identity:234/630 - (37%)
Similarity:320/630 - (50%) Gaps:138/630 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 SKSQSLPAHA--SIKQLDAVILSALRVPADVLANQITLLDFPVFAQIQPDELSSCAWTKKDKHVN 203
            |.|:||...:  |.|..|||:...|:|..:..|:||||:|.|||..|||:||:||.|.||:||..
Zfish    22 SSSESLDGRSLDSAKSFDAVVFDMLKVTPEEFASQITLMDAPVFKAIQPEELASCGWNKKEKHSL 86

  Fly   204 TPNIVAFTKRFNHTSFWTVQEILNAEQPKQRAEIITHFIKVAKKLHELNNLHSLFAIISAMQSAS 268
            :||:||||:|||..|||.|:|||.|:..|.||||:.||||:||||.||||||||.:::||:|||.
Zfish    87 SPNVVAFTRRFNQVSFWAVREILTAQTLKIRAEILGHFIKIAKKLLELNNLHSLVSVVSALQSAP 151

  Fly   269 IYRLTKTWACLSKKDRNAFDRLSDIFSDQDNWANLRSYLESLRL-PCIPYLGLFLTDLIYIDLAH 332
            |:||:||||.:|:||:..|::|..:.|.::|:..:|.|..||:: |||||||::|.|:.|||.|:
Zfish   152 IFRLSKTWALISRKDKATFEKLDFLTSKEENYNRMREYTRSLKMAPCIPYLGIYLFDMTYIDSAY 216

  Fly   333 PHKGG-LEPEQRRNKMNNILRVISNYQQS-NYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYKR 395
            |.... :|.|||.|:|||:||:||:.|.| .|.||......||||.|:|||||||...|:|.|..
Zfish   217 PASDSIIETEQRTNQMNNLLRIISDLQVSCKYDHLITLPHVQKYLMSVRYIEELQKFVEDDNYSL 281

  Fly   396 SLNLEPASPS-----------GPSSSSCSSK---------ESFNVEVVTPALGCLNLSPAKTIGS 440
            ||.:||.:.|           |||..|.|.:         .|....:.||       .||:    
Zfish   282 SLKIEPGNSSPRLVSSKEDLGGPSEVSMSVRYNRRPTCPDTSVVAHLPTP-------PPAR---- 335

  Fly   441 MRMASGTKFVPGHRKCRSLGTKFRSSSLPRNFAEKCQCCIVMIAPGIGTISNKRCRCRRIFGKIA 505
                        |||..|||                              :|..|:...:..|.|
Zfish   336 ------------HRKSHSLG------------------------------NNMMCQFGVVESKSA 358

  Fly   506 THNHSDGHPHHLHLELDPSQVQPRHHLLDDSVLE-HSDALSQA---------DLTSLESA----- 555
            |.               |.:.:.| ||||||.|| ||...:..         .|.|.||:     
Zfish   359 TF---------------PEKEKAR-HLLDDSFLESHSPVRNHTHDSVFTNGISLGSRESSFSDEL 407

  Fly   556 -----------------EGIMCDFTGSDCDLMSPEAAAAMHGC-----------VRRKTVQKEGR 592
                             ...||:...|...:.|...|.:.:.|           :||||:.|||:
Zfish   408 SSTVERGRMYATLGPNWRVPMCNSPRSRSYIYSTPGAVSSYECSTLSSITIEGPLRRKTLMKEGK 472

  Fly   593 KPAVASWQRYWLQIWANSLVYFPPKSFKGSERNDFKREPCKVCPLDGWYAHVSDNTKHKNTFELC 657
            ||.::||:.||:.:..:.|:||..|:.:.:||..:|..|||...|.||...:.||.:|.|.|:|.
Zfish   473 KPTLSSWKCYWIVLSGSILIYFGSKALRANERRHYKSRPCKKITLTGWMVVLPDNPEHPNIFQLT 537

  Fly   658 HRTLGTVYRFRTDSPQMTHLWSNAICKLATMRVPKPLPTNLMSFE 702
            ....|.||:|:|.|.....:|...:.:......|: :|.||||||
Zfish   538 DPDRGNVYKFQTGSRFSAIIWHRHLAEACRSTRPQ-MPANLMSFE 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5522NP_725613.1 RasGEF 163..400 CDD:214539 132/239 (55%)
PH_RalGPS1_2 578..692 CDD:270120 40/124 (32%)
PH 578..685 CDD:278594 40/117 (34%)
ralgps1NP_001093616.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 4/8 (50%)
RasGEF 46..289 CDD:214539 134/242 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..339 7/41 (17%)
PXXP 329..332 2/9 (22%)
PH 456..567 CDD:278594 39/110 (35%)
PH_RalGPS1_2 457..572 CDD:270120 39/114 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 207 1.000 Domainoid score I2835
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H65163
Inparanoid 1 1.050 366 1.000 Inparanoid score I2121
OMA 1 1.010 - - QHG49702
OrthoDB 1 1.010 - - D184404at33208
OrthoFinder 1 1.000 - - FOG0003356
OrthoInspector 1 1.000 - - otm24885
orthoMCL 1 0.900 - - OOG6_104897
Panther 1 1.100 - - O PTHR23113
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5234
SonicParanoid 1 1.000 - - X2715
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

Return to query results.
Submit another query.