DRSC/TRiP Functional Genomics Resources

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Protein Alignment RalGPS and Gm3404

DIOPT Version :10

Sequence 1:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_011239299.1 Gene:Gm3404 / 100041554 MGIID:3781582 Length:311 Species:Mus musculus


Alignment Length:172 Identity:33/172 - (19%)
Similarity:60/172 - (34%) Gaps:58/172 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 MACLRQEKTYKEQQMEPPSMQPQASKTLNIKSTRRKNSIGCLNSFSSSP-----DSPGCYYTIAA 135
            :|.:||...|.::.: |.|...:|.:.|::...:....:.....|:::|     |:.|...|:|.
Mouse   151 LAVVRQFIDYVKRNV-PSSDVDRARELLSVLEDQEAIELQIEQDFATAPEPSEQDASGRQETLAP 214

  Fly   136 SAA----------------------------------PPSKSQSLPAHASIKQLDAVILSALRVP 166
            ..|                                  |||..|::|..      |..:     .|
Mouse   215 RPASETEPQGDKQPREDPELVKGAVLDPFEPKATIELPPSLHQAVPTS------DGTL-----SP 268

  Fly   167 ADVLANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIV 208
            .||.|::.|    .|.|.:.|......::|.:   :.||:.|
Mouse   269 VDVTADEAT----GVAADVSPARQLFVSYTVQ---LGTPDFV 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 10/40 (25%)
PH_RalGPS1_2 578..692 CDD:270120
Gm3404XP_011239299.1 REM 89..177 CDD:100121 7/26 (27%)
Blue background indicates that the domain is not in the aligned region.

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