DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp53D and ARP10

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_010391.1 Gene:ARP10 / 851683 SGDID:S000002513 Length:284 Species:Saccharomyces cerevisiae


Alignment Length:314 Identity:55/314 - (17%)
Similarity:101/314 - (32%) Gaps:123/314 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 KNWDEMEMVWQHTYELLR-ADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAVQAVLS 181
            ||.:|::.:::|.:::.. ....::..|:.|........:..:..|:|:.|.........:|::.
Yeast    39 KNREELKKIFEHYFQICNILGNREVQVLILEDIFISVVEKRIICSILFKEFDCAHVSFVPRAIVH 103

  Fly   182 LYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMGTSAER 246
            ..:......||:|.|...|..|||:            ||  |.|..::                 
Yeast   104 CLSCNTRNAIVIDIGTNYTTCVPIF------------DL--RPLQQFI----------------- 137

  Fly   247 EIVREIKEKLCYVSMNYAKEMDLHGK--VETYELPDGQKIVLGCERFRCPEALFQPSLLGQEVMG 309
                           .|:|    .||  ||:              |...|.:|:.|....:|   
Yeast   138 ---------------KYSK----RGKRQVES--------------RIPLPGSLYMPIFFDEE--- 166

  Fly   310 IHEATHHSITNCD------------------MDLRKDMYANIVL----SGGTTMFRNIEHRFLQD 352
                  ::..||:                  :|||:.:..||::    ....|:.||: .:...|
Yeast   167 ------YNSKNCEVDETPVINLVKNIVESLPIDLRRPLRENIIIVNIEEAYETVIRNL-FKLKMD 224

  Fly   353 LTEMAPPSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIV 406
            .:::..|.             :.|..||..|.:.         |.|:  ||.||
Yeast   225 TSKIQFPK-------------NYWQAGSACAKIL---------LHYK--GSNIV 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 53/312 (17%)
ARP10NP_010391.1 ASKHA_ATPase-like 6..>205 CDD:483947 40/238 (17%)

Return to query results.
Submit another query.